Gene Gmet_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0779 
Symbol 
ID3739342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp856714 
End bp858018 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content55% 
IMG OID637778057 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_383746 
Protein GI78221999 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTC CCCTTCAAAG CGTTGTCCCC AGGACGGAGG GGGACGCTTT AACACTCCTC 
CATGAGTTGC AGGTCCACCA GATCGAACTG GAAATGCAGA ATGAGGAGCT GCACCGGTCA
CAGGATGAGT TGCGAAGTTC CCGGGACCGT TATTCGCTCC TCTATGATTT TGCCCCGGTG
GGCTATTTCA CCCTCTCCCG CAACGGAACG ATCCTCTCCG CCAACCTGGC CGGGGCGACC
CTGCTGAATA CGGAACGCTC CCGGCTTATC AGGCAGAATT TTGGCCGTTT TCTCGACAAA
ATCAATTCCG CGCGCTTCAA GGAATTGCTG GACAAGGTGT TTTCCGGCAA TAACACGCAC
ACGTTCGAGC TGCTCATGTC GAAGGGGCTG CAACAGCCGC TCTTCGTGCA GATAGAGGGG
ACCACTGTCG TCCCTGGTGA CGAGTGCCTT ATGGCGGTGA TCGATATCAC CCCCAGGAAA
CAGGCGGAGG ATAACCTCCT CCGGGCCAGG GAGGAGTTGG AGCAGCGCGT TTTGGAACGG
ACCGTGGAAC TGGCCCGATC CATTGACCGG GAAAAGGAGG AAATGACCGG GCGGCTGCAG
GCGGTGGAAG AGCTCCGGAA CAAGGAACTG CTGCTGGTTC ACCAGGGGAG GATGGCCGCC
ATGGGGGAGA TGCTCGCCAA TATCGCCCAC CAATGGCGGC AATCGTTGAA TGTCATGGGG
CTATTGATTC AGCAACTAGG GTTGTTCAGC GAATCCGACT GCCTTGACAA GCAGTTGGTC
AGCGTTAACG TTGCGAAGGC GATGGAAATC CTCAAACACC TGTCCCAAAC CATCGATGAT
TTCCGGGCCT TTTCCGAACC GGACCGGGAA AAGATCCCGT TCAGGATAAA CCAGGTCATC
AAAAAAACAC TGGAACTCGT TGGCGAACTC TTCACGCAGC AAGGCATTTC AATCCAGTCC
GATTTTGTCC AGGATTCGCA GGTGGCGGGA TTCCCCAATG AATTCAGCCA GGCGCTGCTC
AATCTCCTGT TAAACGCACG GGATGCGCTC GTTGCCGATA AATGGATAAA AGTGAGTTCC
CGGCCGGAGA ACGGCAGGGC TGTTGTCACG ATCACCGACA ACGGCGGCGG GATCGATGAG
AACATTATCG ACAAGGTTTT CGATCCCTAT TTCACCACCA AGAAACTCGG CAAGGGAAGC
GGCATCGGAC TTTTCATGTC AAAAAACATC ATTGAACGAA ACATGGGAGG CCACTTGACC
GTTCGCAACA TCAAAGAATG CGCCGAATTC AGGATCGAGG TCTGA
 
Protein sequence
MELPLQSVVP RTEGDALTLL HELQVHQIEL EMQNEELHRS QDELRSSRDR YSLLYDFAPV 
GYFTLSRNGT ILSANLAGAT LLNTERSRLI RQNFGRFLDK INSARFKELL DKVFSGNNTH
TFELLMSKGL QQPLFVQIEG TTVVPGDECL MAVIDITPRK QAEDNLLRAR EELEQRVLER
TVELARSIDR EKEEMTGRLQ AVEELRNKEL LLVHQGRMAA MGEMLANIAH QWRQSLNVMG
LLIQQLGLFS ESDCLDKQLV SVNVAKAMEI LKHLSQTIDD FRAFSEPDRE KIPFRINQVI
KKTLELVGEL FTQQGISIQS DFVQDSQVAG FPNEFSQALL NLLLNARDAL VADKWIKVSS
RPENGRAVVT ITDNGGGIDE NIIDKVFDPY FTTKKLGKGS GIGLFMSKNI IERNMGGHLT
VRNIKECAEF RIEV