| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0663 |
|---|
| Symbol | |
|---|
| ID | 3738312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 725802 |
|---|
| End bp | 727247 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637777941 |
|---|
| Product | nitrogenase molybdenum-iron protein alpha chain |
|---|
| Protein accession | YP_383630 |
|---|
| Protein GI | 78221883 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.508011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGG CAATCAGAAA TATTGACGGG ATAACCAAGG CGTCGACCCA GGAGATGATC
GACAAGGTCT TGGAGGTCTA TCCGGAAAAG GGGCGGAAGA AGCGGGCGCC CCACCTGGCT
CCCAACGACC AGGCGAGTTG CAGCGCTTGC GTCAAATCCA ACAAAAAGAC AGTGCCCGGC
GTCATGAGTG CCCGGGGCTG CGCCTATGCC GGCGCCAAGG GAGTTGTCTG GGGGCCGATC
CGCGACATGG TCCACGTCTC CCACGGCCCG GTGGGGTGCG GCTGGTACTC CTGGGGAACC
CGGCGCAACC TCATGTCCGG CAAGCTGGGA GTCGACCAGT TCGGCATGCA GTTCACCTCC
GACTTTCAGG AGAAGGACAT CGTCTACGGC GGCGACAAGA AACTGAAGGT GCTGCTCAAG
GAGGCGAAGG AGCTCTTCCC CCTGGCCAAG GGGATCTCGG TCCTCTCCGA GTGCCCGGTG
GGGCTCATCG GCGACGATAT CAACGCCGTG GCCAAGACGA GTGCCAAGGA GCTGGACATC
CCGATCATCC CCTGCAACTG CGAGGGGTTC CGGGGGGTCT CCCAGTCCCT GGGGCACCAT
ATCTCCAACG ACACCATCCG CGACTACATC ATCGAGACCC GCGAGTTCGC CGAGCCCGTG
GGCCCCTACG ACATCGCCCT CATCGGCGAG TACAACATCG GCGGGGACGC CTGGTCCACA
AAGCCCCTGC TGGAGGAGTG CGGCTTCAAC GTCAAGGCGG TCTGGACCGG CGACGGCGAG
ATGGAGAAGA TCGCCGCCAC CCATCAGGTG CGGCTCAACG TCATCCACTG CTACCGTTCC
ATGAACTACA TGTGCAAGGT GATGGAAGAA AAGTATGGCA TTCCCTGGAT CGAGCTGAAC
TTTTTCGGAC CCACCAAGAT CCGGGAATCG CTCCGCAAGC TGGCCGAGCT CTTTGACGAC
ACCATCAAGG AGAAGGTGGA GGCGGTCATC GCCAAGTACG ATCCGCAGAT GCAGGCGGTG
ATCGAGGAGG TCCGTCCCCG GCTCGAAGGG AAGAAGGTGA TGCTCTATGT CGGCGGCCTC
CGCCCGCGCC ACACAATTGG CGCCTATGAG GATCTCGGGA TGCTCTGTGT CGGCTCCGGC
TACGAGTTCG CCCATACCGA CGACTACGAC CGGACCGCCC CGGAGATGCC CGATGCCACC
GTGGTCTACG ACGACGCGTC CGAGTTGGAG ATGGAACAGT TCGCCCACGT GCTGAAGCCC
GACTTGGTCG CCTCCGGCAT CAAGGAGAAA TACGTCTTCC AGAAGATGGG GCTGCCGTTC
CGCCAGATGC ACAGCTGGGA CTATTCCGGC CCGTACCACG GCTACAAGGG GTTCCCGATC
TTTGCCAGAG ACATCGATAT GGCAATTAAC TCGCCGACGT GGAATTTGGT CAGAAGCCCT
TATTAG
|
|---|
| Protein sequence | MSKAIRNIDG ITKASTQEMI DKVLEVYPEK GRKKRAPHLA PNDQASCSAC VKSNKKTVPG
VMSARGCAYA GAKGVVWGPI RDMVHVSHGP VGCGWYSWGT RRNLMSGKLG VDQFGMQFTS
DFQEKDIVYG GDKKLKVLLK EAKELFPLAK GISVLSECPV GLIGDDINAV AKTSAKELDI
PIIPCNCEGF RGVSQSLGHH ISNDTIRDYI IETREFAEPV GPYDIALIGE YNIGGDAWST
KPLLEECGFN VKAVWTGDGE MEKIAATHQV RLNVIHCYRS MNYMCKVMEE KYGIPWIELN
FFGPTKIRES LRKLAELFDD TIKEKVEAVI AKYDPQMQAV IEEVRPRLEG KKVMLYVGGL
RPRHTIGAYE DLGMLCVGSG YEFAHTDDYD RTAPEMPDAT VVYDDASELE MEQFAHVLKP
DLVASGIKEK YVFQKMGLPF RQMHSWDYSG PYHGYKGFPI FARDIDMAIN SPTWNLVRSP
Y
|
|---|
| |