| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0661 |
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| Symbol | carB |
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| ID | 3738310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 721123 |
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| End bp | 724323 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637777939 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_383628 |
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| Protein GI | 78221881 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00149325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.138255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGC GCGACGACGT CAAAAAGGTT CTCATCATCG GTTCCGGCCC CATCATCATC
GGCCAGGCTT GCGAGTTCGA CTACTCCGGC ACCCAGGCCT GCAAGGCCCT GCGCAAGCTC
GGCTACCGGA TCGTGCTGGT GAACTCCAAC CCCGCCACCA TCATGACCGA CCCCGGCATG
GCCGACGCCA CCTATATCGA ACCCCTCAAT GTGGACACCC TGACCGAGAT CATCCGCAAG
GAGCGCCCCG ACGCCCTCCT CCCCAACCTG GGTGGCCAGA CCGGTCTCAA CCTCTCGTCG
GCCCTGGCCC AGGCGGGGGT GCTGGACCGG TACGGGGTCA GGGTCATCGG CGTCAACCTC
GACGCCATCA AGCGGGGGGA AGACCGTGAA ACTTTCAAGG AGACCATGAC GCGGTTGGGC
ATCGAGACCG CACGGAGCGA GATTGCCACA ACCATGGAAG GGGCCCTGGA CGTGGTGTCC
CGCATCGGGC TGCCGGTGGT GATCCGCCCC GCCTACACCA TGGGGGGGAC CGGCGGCGGC
TTCGCCTACA ACATGGAGGA GTTCCGGACC ATCGTTGCTC GGGGACTCGC CGCCAGCCCG
GTGAGCCAGA TCCTCGTGGA GGAATCGGTG CTGGGGTGGG AGGAGCTGGA GCTGGAGGTG
GTGCGGGACG CCAAAAACCA GAAGATCACC GTCTGTTTCA TCGAGAACGT GGACGCCATG
GGGGTTCACA CTGGCGACTC CTACTGCACG GCCCCAATGC TCACCATCTC TTCTGAACTC
CAGGCCCGGC TCCAGGACTA CGCCTACCGG ATCGTCGACG CCATCGAGGT GATCGGCGGC
ACCAACGTCC AGTTCGCCCA CGACCCCAAA ACCGGGCGGG TGGTGGTCAT CGAGATCAAC
CCCCGCACCT CCCGCTCCTC GGCCCTGGCC TCCAAGGCCA CCGGGTTCCC CATTGCCATG
GTGTCATCGC TCCTGGCCGC GGGGCTTACC CTGGACGAAA TCCCCTACTG GCGGGACGGC
TCCCTGGAAA AGTACACCCC GAGCGGCGAC TACGTGGTGG TGAAGTTCGC CCGCTGGGCC
TTCGAGAAGT TCAAGGGGGT CGAGGACAAG CTCGGCACCC AGATGCGGGC CGTGGGCGAA
GTCATGAGCA TCGGCAAGAA CTACAAGGAG GCGCTCCAGA AGGCGATCCG CTCACTGGAG
ATCGGCCGCC ACGGCCTCGG CTTTGCCCGG GACTTCAACG CCACATCGCT CCCCAAGCTC
CTGGAGATGC TGGCCGAGCC ATCCAGTGAG CGTCAGTTCA TCCTCTACGA GGCCATCCGC
AAGGGGGCCG ACCTGGACCA GCTCCACCAG CTGACCCATA TCAAGCTCTG GTTCCTGCAG
CAGATGAAGG AGCTGGTGGA ACTGGAGGAG GAGATCCTCC GGCACCGGGG GAGCCTCCCC
CCGGACGAAC TGCTCCTCCA GGCCAAGCGG GACGGCTTTG CGGACCGCTA CCTAGCGAAG
CTTTTGGAGA TCCCGGAAAC CCAAGTCCGC GAAAAGCGCC TCGCCCTGGG GCTTACCGAG
GCGTGGGAAG CGGTGCCGGT CAGCGGCGTG GAAAACGCCG CCTACTACTT CTCCACCTAC
AACGCGCCGG ACACGGTGCC GGTCAGCGAC CGGAAGAAGA TCATGGTGCT GGGGGGCGGC
CCCAACCGGA TCGGCCAGGG GATCGAGTTC GACTACTGCT GCGTCCACAC CGCCTTAGCC
CTGCGGGAGG CCGGTTACGA GACCATCATG GTCAACTGCA ACCCGGAGAC GGTCTCCACC
GACTACGACA CCTCGGACAA GCTCTACTTC GAGCCCCTCA CCGTGGAGGA TGTCCTCTCC
ATCCATGCCA AGGAGAAGCC CGAAGGGGTG GTGGTCCAGT TCGGGGGGCA GACCCCCCTC
AACATCGCCG TCGAACTGGA GGCGGCCGGA GTGCGAATCA TCGGCACCAC GCCGGAGACC
ATCGACCTGG CCGAGGACCG GCAGCGCTTC GCCAGGGTGA TGACGGAGCT GGGGATACCC
CAGCCCGAAT CGGGGATGGC AAGCACCCTG GATGAGGCCC TGGCCGTTGC GGGCCGGATC
GACTACCCCC TCATGGTGCG CCCCTCCTAC GTACTGGGGG GCAGAGCCAT GGAGGTGGTC
CACGACGAGG AGATGCTCCG GGAGTACGTC ACCAAAGCCG TGGATGTCTC CCCGGAGCGA
CCGATCCTCA TCGACCGGTT CCTGGAGAAC GCCATCGAGG CCGAGGCAGA CGCCATCAGC
GACGGGACCG ACGCCTTCGT GCCGGCGGTC ATGGAGCATA TCGAACTGGC TGGAGTCCAC
TCGGGGGACT CGGCCTGCGT CATCCCCCCG GTCAGCATTC CCCAAAAACA CATCGATACG
ATTGATGAGT ACACCCGCAA GATCGCTGTG GCCATGGGGG TGGTGGGGCT CATGAACATC
CAGTACGCCA TCGCTGACAA CACCGTCTAC ATCCTGGAGG CGAACCCCCG GGCAAGCCGC
ACCGTCCCCC TGGTCTCCAA GGTCTGCAAC ATCCCCATGC CCCGCATCGC CGTGCAGGTC
ATGCTCGGGG CGAAGCTGAA GGATATGGGG CTCGCCCGCC GCACCTTCCC CCACTTCGGG
GTCAAGGAGG CGGTCTTCCC CTTCCCCATG TTCCCGGAGG TGGACCCGGT GCTCGGCCCG
GAGATGCGCT CCACCGGCGA GGTGCTGGGG CTGGCGGGCA ATTACGGCCT CGCCTTCTAC
AAGGCACAGG AAGGGGCCAA CGCCCAACTC CCCCTCTCCG GTTCGGTCCT CTTCACCATC
GCCGACCGGG ACAAGGAGGG TGCCCTGGCG GCGGCCCGCC GCTTCGCGGA ACTGGGCTTC
ACCATCCGGG CCACGGAAGG AACCTGCCGG TTCCTGGCCG GCCACGGCAT CGCCGCGACG
CCGGTCACCA AGCTTCACGA GGGGCGCCCC AACCTGGTGG ACGCCATCAA GAACCGGGAG
ATCCATCTGG TAGTCAACAC TCCTGCCGGC AAGCAGAGCG CCCATGACGA CTCCTACATA
CGCAAGGCCG CCATCGCCAA CAAGATCCCC CACATCACCA CCGTGGCCGC CGCCGTAGCC
GCCGCCGAGG GGATCGCGGC CCGCCGCAAC GGCAAGGAAC CGGTCATGAG CCTGCAGGAG
TACCACGCAG GCATCCGCTG A
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| Protein sequence | MPRRDDVKKV LIIGSGPIII GQACEFDYSG TQACKALRKL GYRIVLVNSN PATIMTDPGM
ADATYIEPLN VDTLTEIIRK ERPDALLPNL GGQTGLNLSS ALAQAGVLDR YGVRVIGVNL
DAIKRGEDRE TFKETMTRLG IETARSEIAT TMEGALDVVS RIGLPVVIRP AYTMGGTGGG
FAYNMEEFRT IVARGLAASP VSQILVEESV LGWEELELEV VRDAKNQKIT VCFIENVDAM
GVHTGDSYCT APMLTISSEL QARLQDYAYR IVDAIEVIGG TNVQFAHDPK TGRVVVIEIN
PRTSRSSALA SKATGFPIAM VSSLLAAGLT LDEIPYWRDG SLEKYTPSGD YVVVKFARWA
FEKFKGVEDK LGTQMRAVGE VMSIGKNYKE ALQKAIRSLE IGRHGLGFAR DFNATSLPKL
LEMLAEPSSE RQFILYEAIR KGADLDQLHQ LTHIKLWFLQ QMKELVELEE EILRHRGSLP
PDELLLQAKR DGFADRYLAK LLEIPETQVR EKRLALGLTE AWEAVPVSGV ENAAYYFSTY
NAPDTVPVSD RKKIMVLGGG PNRIGQGIEF DYCCVHTALA LREAGYETIM VNCNPETVST
DYDTSDKLYF EPLTVEDVLS IHAKEKPEGV VVQFGGQTPL NIAVELEAAG VRIIGTTPET
IDLAEDRQRF ARVMTELGIP QPESGMASTL DEALAVAGRI DYPLMVRPSY VLGGRAMEVV
HDEEMLREYV TKAVDVSPER PILIDRFLEN AIEAEADAIS DGTDAFVPAV MEHIELAGVH
SGDSACVIPP VSIPQKHIDT IDEYTRKIAV AMGVVGLMNI QYAIADNTVY ILEANPRASR
TVPLVSKVCN IPMPRIAVQV MLGAKLKDMG LARRTFPHFG VKEAVFPFPM FPEVDPVLGP
EMRSTGEVLG LAGNYGLAFY KAQEGANAQL PLSGSVLFTI ADRDKEGALA AARRFAELGF
TIRATEGTCR FLAGHGIAAT PVTKLHEGRP NLVDAIKNRE IHLVVNTPAG KQSAHDDSYI
RKAAIANKIP HITTVAAAVA AAEGIAARRN GKEPVMSLQE YHAGIR
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