Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0658 |
Symbol | |
ID | 3738307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 718358 |
End bp | 719284 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637777936 |
Product | ABC transporter-related protein |
Protein accession | YP_383625 |
Protein GI | 78221878 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00292078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACGCCA TCATCACCGA CAACCTCACC AAACGCTTCG GCACCCTGAC CGCCGTGGGC GGACTCACCC TCTCCGTGGC CCAAGGGGAG CTCTTCGGCC TCGTGGGCTC CGACGGCGCC GGCAAGACCA CCACCATGCG AATGCTGACC GGCATCATGG ACCCCACGGA GGGGGCGGCC CGGGTCATGG GACGCCACAC GGTGCGGGAA GCGGAGCCCC TCAAGGAGGA GATCGGCTAC ATGAGCCAAC GGTTCGGCCT CTACCCGGAC CTGACCGTGC TGGAAAACCT CCACTTCTAC GCCGACATCT ACGGGCTCCC TTGGCGGGGG CGCGACGAGA AGATCAGCCG CCTCCTCTCC TTCAGCAACC TGACCCCCTT CGGAAAGCGG CTGGCCGGCA ACCTCTCCGG CGGCATGAAG CAGAAGCTGG GGCTTGCCTG CGCCCTCATC CATACCCCCA AGGTCCTCTT CCTGGACGAG CCCACCAACG GGGTCGACCC GGTCTCCCGC CGGGACTTCT GGCGCATCCT CTACCAGCTC CTGCGGGAAG GGGTGACGGT TTTCGTGGCC ACCGCCTACC TGGACGAGGC GGACCGCTGC AATCGCGTGG GGCTCATCCA CCGGGGGAGG CTCCTGGCCT GCGACACCCC CGACAACCTC CGGGGGCTCA TGGACGGCAC CATCCTCGAA GTGCTGACCC CTGCTCCGAG ACGAGCCGCC CTGCTCCTGA GGGAACGCCT TGAGGGAGAA TCCGTGGGAA TCTTCGGCGA CCGGCTCCAC GTGGTCACGC GGGATGCGGC GGAGGCAGGC CCTGCCATCA AGGCGATCAT GGAGGGGGCG GGGGTGACGG TCCAGAGCAT CCGCCCCATC GAGCCGAGCC TTGAGGATGT TCTGGTATCG GTGCTTTCCG GGGAGGCAAC CCAATGA
|
Protein sequence | MDAIITDNLT KRFGTLTAVG GLTLSVAQGE LFGLVGSDGA GKTTTMRMLT GIMDPTEGAA RVMGRHTVRE AEPLKEEIGY MSQRFGLYPD LTVLENLHFY ADIYGLPWRG RDEKISRLLS FSNLTPFGKR LAGNLSGGMK QKLGLACALI HTPKVLFLDE PTNGVDPVSR RDFWRILYQL LREGVTVFVA TAYLDEADRC NRVGLIHRGR LLACDTPDNL RGLMDGTILE VLTPAPRRAA LLLRERLEGE SVGIFGDRLH VVTRDAAEAG PAIKAIMEGA GVTVQSIRPI EPSLEDVLVS VLSGEATQ
|
| |