Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0641 |
Symbol | rplF |
ID | 3738348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 706885 |
End bp | 707424 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637777919 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_383608 |
Protein GI | 78221861 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000000000903619 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000000381043 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAGGA TCGGCAAACG TCCTATTGAG ATACCGAGCG GGGTAAAGGT TTCGTACGTA ACTCCTATTC TGAAGGTCGA GGGGCCGAAG GGTTCGCTTT TACGCGAGAT TATGAGCGAC ATCGCCCTTG AGATAGAGGA GAAGAGTGTT AGTGTTAATA GAGCCGATGA TGCTATAAAG TCACGTTCGG CCCATGGCTT GACAAGAACG CTGATCAATA ACATGGTCGT TGGTGTAACT AAAGGGTTCG AAAAAATACT TGAGATAAAC GGCGTTGGTT ATAGGGCAGA GGCAAAGGGC GATGTTCTTA GCCTTAGCCT TGGTTACTCT CATCCGATTA ATTTTCCTCT CCCTAAAGGC ATAACGGTTG AGGTGGATAA AATGACCAAG GTCTTTGTCA GAGGGATTGA TAAAGAGCTC GTTGGCCAGA CTGCAGCCAA GATTCGTTCT TTCCGCGGTC CCGAACCCTA TAAGGGCAAG GGTATAAAGT ATGCCGACGA GAGAATTCTG AGGAAGGCCG GCAAGACCGG CAAAAAATAG
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Protein sequence | MSRIGKRPIE IPSGVKVSYV TPILKVEGPK GSLLREIMSD IALEIEEKSV SVNRADDAIK SRSAHGLTRT LINNMVVGVT KGFEKILEIN GVGYRAEAKG DVLSLSLGYS HPINFPLPKG ITVEVDKMTK VFVRGIDKEL VGQTAAKIRS FRGPEPYKGK GIKYADERIL RKAGKTGKK
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