| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0627 |
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| Symbol | rplD |
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| ID | 3739250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 700936 |
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| End bp | 701598 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637777905 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_383594 |
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| Protein GI | 78221847 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00000530014 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000000000031805 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGTTAAAGC ACGTTAGACT TGCAGGACCG GAGATAGTTA TGGCTACAAT CGACGTTTTC
GATATCAATA AGAACAAGGT AGGTGAGATG GACCTCAGTG ACGCTGTCTT TAACGGCGAC
GTCAGGGAAT ATCTCATCCA TGAAGCGGTT AAGGTTCAGC TTGCAAACCG TCGCGCAGGG
ACCGTTGGCG TAAAGAATCG TGCGGCTGTT TCTGGTGGAG GCAAAAAGCC CTTCAAGCAG
AAAGGTACCG GGCAGGCTCG CCAGGGTTGC ATACGTGCAC CGCACTATGT CGGTGGCGGT
GTTGCCTTTG GCCCTCAAGC TAAGACCTAT GCACTTTCGA TGAACAAAAA GGCCAGGAAG
GCTGCGGTTC GATCAGCTCT GTCCATGCTT TTCAAAGAGA ATAAGCTTTC AGTCCTAGAT
TGCTTGTCGC TGCCATCAAT CTCGACAAAG GGTTTTGTTG GCGTTCTTAA AACGTTCGAC
GTGACGAAGA CCCTTGTTAT TATTGATGAG GCAAATACGA ATCTTGAGTT GTCTGCGCGC
AACGTGAAGG ACGTTAAGGT TCTTAAAGCT GAGCATCTTA ATGTTTTCGA TATTGTTAAG
TTTAACAATA TCATACTCAC TCAGTCAGCT GTTCGGAAGA TCGAAGGAGC ACTGCAGTCA
TGA
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| Protein sequence | MLKHVRLAGP EIVMATIDVF DINKNKVGEM DLSDAVFNGD VREYLIHEAV KVQLANRRAG
TVGVKNRAAV SGGGKKPFKQ KGTGQARQGC IRAPHYVGGG VAFGPQAKTY ALSMNKKARK
AAVRSALSML FKENKLSVLD CLSLPSISTK GFVGVLKTFD VTKTLVIIDE ANTNLELSAR
NVKDVKVLKA EHLNVFDIVK FNNIILTQSA VRKIEGALQS
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