| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0621 |
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| Symbol | rpsL |
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| ID | 3739244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 695766 |
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| End bp | 696137 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637777899 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_383588 |
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| Protein GI | 78221841 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000000330783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 1.9094399999999998e-21 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCAACGA TTAACCAGCT GATCCGCATC GGCAGGAAGA GTAAGAAGGA AAAGTCGAAT
TCCCCCGCGC TGAAGAGCTG TCCCCAGAAG CGTGGCGTCT GTACTCGGGT TTATACTACG
ACCCCTAAGA AGCCGAACTC TGCGTTGAGG AAAGTTGCAA GGGTTCGTCT GACAAATGGA
ATTGAGGTTA GTTCTTATAT TCCGGGGGTT GGGCATAATC TTCAAGAGCA CTCTGTAGTG
CTTATTCGGG GTGGTCGGGT TAAGGACCTT CCTGGTGTTC GGTATCACAT TGTTCGTGGT
ACGCTGGATT CTGTTGGTGT GAAGGATCGG AAGCAGGCTC GTTCCAAGTA TGGCGCCAAG
CGGCCCAAGT AA
|
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| Protein sequence | MPTINQLIRI GRKSKKEKSN SPALKSCPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
IEVSSYIPGV GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG TLDSVGVKDR KQARSKYGAK
RPK
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