| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0616 |
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| Symbol | rplA |
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| ID | 3739239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 685276 |
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| End bp | 685980 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637777894 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_383583 |
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| Protein GI | 78221836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00000217065 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGAAGA CAGCGAAGAA GCATAGGGAA GCCTTGGCGA AGATAGACCG AAGCCGGACC
TACCCCCTCG TTGAAGGTAT AGAAAGTGTC AAGTCGGTAG CCTACGCCAA ATTTGACGAG
ACCGTGGAGG TCGCTGTTCG GTTGGGCGTT GACCCCCGCC ATGCCGATCA GATGGTTCGT
GGCGCCGTAG TTCTGCCGAA TGGCCTCGGC AAGGACGTCC GGGTACTCGT TTTCGCCAAG
GGCGAAAAGG AGAAGGAGGC CCGTGACGCC GGCGCTGACC ATGTAGGCGC CGAAGACCTC
GTTGCCAAGA TCCAGGAGGG GTGGTTCGAC TTCGACACCG CCATCGCGAC TCCCGACATG
ATGGGTGTTG TCGGCAAGAT CGGTAAGCTT CTTGGTCCCC GCGGGCTCAT GCCGAACCCG
AAGGTCGGCA CGGTCACGTT TGATGTGGGC CGTGCGGTTA AGGAGTCCAA GGCCGGGAAG
GTTGAATTCC GGGTCGAGAA GGCCGGTATT GTCCATGCGC CGGTCGGTAA GGCATCGTTT
GATGCGGACA AGCTCAAGGA AAACCTTCTT GCGCTTGTGG AGGCGCTCGT TAAGGCGAAG
CCGTCCGCAG CCAAGGGTAC CTACATCAAA AAGATCAGCC TCTCTTCCAC CATGGGACCG
GGGCTGAATC TGGATATCGC AGACGTCCAG TCGAAGCTTG TCTGA
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| Protein sequence | MPKTAKKHRE ALAKIDRSRT YPLVEGIESV KSVAYAKFDE TVEVAVRLGV DPRHADQMVR
GAVVLPNGLG KDVRVLVFAK GEKEKEARDA GADHVGAEDL VAKIQEGWFD FDTAIATPDM
MGVVGKIGKL LGPRGLMPNP KVGTVTFDVG RAVKESKAGK VEFRVEKAGI VHAPVGKASF
DADKLKENLL ALVEALVKAK PSAAKGTYIK KISLSSTMGP GLNLDIADVQ SKLV
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