| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0576 |
|---|
| Symbol | |
|---|
| ID | 3738233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 626056 |
|---|
| End bp | 629910 |
|---|
| Gene Length | 3855 bp |
|---|
| Protein Length | 1284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637777850 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_383544 |
|---|
| Protein GI | 78221797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCAC TCAAGCCAAG GGGCAGTACC CGCAATGGGT GGTGGGGAAA AGTAATTCTC
GTTGTCGCAC TCCTGTTGGG CGCGGGTTTT GTTCTGTTCC ATCATGGGGG GAGGCTGTCT
CTTGCCGCTA CATCGGGTCC GAATGCTGTT GCGACCGGAA CGACATCCGG CTGGACGGGT
GCGACGAACA TTTACACACA GAACAGCACC TATGCGACCT ACGCCGGATC CTCCAGCACG
GCATACCTGC TTGGTACCAA TTACGGTTTT GCCATCCCGA CCGGATCGAC GATCAATGGC
ATTACTGTCG ATATCTGGGG GTTCAACAGC AACACGACTA CCGCTAACCG CATGATCAAG
ATTTCGCTCA CCAAGACCGG CAACTCCACG GTGGCGGGTA CCACGAAGAC AGGCGTCACG
CTTCCGACCG CCAACGGCCA GGTGACCCAG GGGGGCGCCG CCGACCTCTG GGGAACCACT
TGGACGGCCG CTGATGTCAA CAGTGCGAAC TTTGGCGTCA TCATCGCAGA CAATGATACG
ACTATCGGCG GCACGCTCAG TATTGACTAC GTGCGGGTCA CCGTCACCTA CACCCCGCCG
ACGACGCTCG GCAACGGTGC CACCGGCACG AACGCCACCG TCTGCCCCGG TGATGCCTTG
CAGAAACTCG ACGGTTTCTC TTTCACGACC GCCACCGGGA CCGACAGTAT TACCGCCCTC
ACCGTCACGA CCACCAACGG CACTGCCATC GCCGGCATGT CGATCTGGGA CGAGGCGGGG
ACTACCCAGT ATTTCACCAC CGTGAACAAC CCGGGAACCA ACACCTGGAG TTTCAGCGGC
GGTACGCCGA TCCCCGTTGA CACGACCGTC AAGAACTACA AGGTTCTGGT AACGTACAAG
GATCACCCCA CCGCTCCGGC GGGTTCAACC GCCACCACGG CCGCCGTCAC CGCCTTCACC
CCTTCGACCG GGGTGGCGGC CGGCACGGAT ACGGCGGACA CGACACTCAC CCTCGACAAT
GTCCCCGGCA CTGCAGCCGT GTGGGGGACA AACACCGGCG GCGTCGCATC GGTGACCCTC
AACTGGACCC TCGGCGCTGC AGGAGAGAAC GTGGTAATAG TCCGGTATGG GGCGAACACC
GACACCACCA TGCCCGTTGA TGGCACTTCC TATACCGTGG GCTCTTCGTT CGGGACCGGC
GGGACGGTAG CCTACGCCGG ATCGGGTGTT ACCGCCACCG ACACTGTCCA GGCCGGGACG
TATTACTACC GCATCTTCGA ATACGATGGC TGCTTCAACT ATGCGGCCAC CGCCCCATGG
TCCACCGCCG TCACGGCCAC ACCGCAGAAC AAGACGGTCG CCGGCTCCGC CTCCGCCATG
TGGGCATCCC CCACCAGCAT TTCGGTCATG GTCGGCTATA CGAATGACGA CAACAGCAAC
AACAACATCA CCATCGAGTA CAGCAGCGTT TCCGCGTCCA CCGGTTTCGT CACGGCGGTG
ACCACGCCGA CCCACCCGGC CGTCCCCTAC CAGTACACCA TAGCCGGCCT AACCACCGGC
AGCACCTATT GGGTCAGGGT CACCTGGAAC GACGTGGATG GTGTGCTCGG CACGAGCCCC
ACGGTGCTTC CCTCCATCGT CCTCACCCAG TACAGTCCGC TCCTGCACAA CAGTGCCATC
CTCGGATCGA ACAAATGGCC GAGCGGCTGG GGGGTGACCG GCGGCAAGTA CGGCGCCTTT
TCCTGCACCA CCTGCCACAC CATGAAGTCG GCCAACATCA AGCGGGTCCG AACCTCCATA
ACCGCTCCCT TCGGCAACTG GAGTTCCTCC GGTACCCCGA GCGTCTCCGT CAGCTTCACG
AACCTCACGA GCATGGGGCA TGACGACGAC AATCACACCA CTTCCAACCG GGTATGCGAG
GTCTGCCACA ACAGGAACAA GTACCACAAC TACAACACCA CCAAGAACAC CGGCGGAAAG
AGCCACAACA ACGGCATTGA CTGCGTCGGC TGCCATTCTC ATAATATTGC CTTCAAAGGG
GAGGAATCCA AGGGGGGCAA AGCCTGCACC AACTGCCACA ACAGCGGCAA GTTCGCCTCT
GCCCTCAAGG GATCGAACGG GTACCACCAC TATCTGCAGA ACACCGACAG CATCACGTAC
GGCACCATCG CGCAGCCCGC CCTGACGGGA GGGGCCACCG ACACCAACCG CAGCTGTCTC
ATGTGCCACG TGGACCACGA CATCTTCCGC CCCGACATCA ACCTGAACGC CGGCAGCGGT
CGGGCCAAGA ACCTCCGCGC CGACATATCG ACGACCCCGA CCGCCGCCGA TACGACCAGT
TACGCCAACA CCGACTTCAT TCCCGATGCC ACGAAGAACG GCGGTATCTG CATCTCCTGC
CACCGGACTG CGCAGACGAA CCTCGGCTAC ACCCAGCCGG ACGGCTCCCA GAGAAAGCCG
GCGATCCCCT ATCCTGATAC CGTTCAGAAT CAGATCTTCG TCTACATGAG CTCGGCCCAC
AACTACACGG TAAGCTCCAC CTTCTCCGGA ACCGGCACCA ACTCATTTGT CGCCAACTGC
TCGAAGTGCC ACAACGACAC TCTGAACCCG AAATCCGGCT ACAATGCCCA GGGGACCTCA
CGGATCAAGT TCGGCAACCA TACCAGCTCT ATCCCCCAGA TGCTGACCAC CTTCGGCGCC
CCGGTCACCT CGTCCCAGAA GGCCGATTAC TGCTTCAAGT GCCACGGCAA CGTGGCCCCC
TTCAGCACGA CGACCCCGAA CATCAACGTG TATCTGTCAA CGCCGCGGTA CGATTGGTAC
AGCACTTCGC TCATGACCGC CCGGACCAAG AACATCGCCG CCGACTTCAA CGACGCGGCC
CTGACCCACA AACACCAGGT CCAGCTTGCC GCCTATGTTG ACAAACACCA TGCCGGCGAG
ACCAGGGCCG AGCTCTCCGC CAACAAGCAC GTCACCTGCG ACGACTGCCA CAACCACCAT
GGTTCCAAGA AGGGGCTTCA TATCCAGGCC GGTCCCCGCA ATCTCTCGCC CGCCCTGAAA
GGGGCCATGG GGGTCACCCC CCCCACCTGG AACGCGTGGT CCACGGCCCG GGCCGCCGGC
ACCACGGTAG TCTGGCCGGA TGCCCTGGTC CCGGCCTCGG AGGAGTGGCA GATCTGCTTC
AAGTGCCACA GCAGCTACAA CACCAACCAG GCCGGGTGGG TCGGCACCAA TTACGGCGGC
GCCGACCTGG CGATCCAGCT GAACCCCACC TACAAGTCGG GCCATGCCAT CATCGGCAAC
TCCCGGGTGC CGGCGGATTC GCCGTCCAAC TTCGCCGCCG GGACCCCCTG GAACAAGAAC
AGCATCATGA CCTGCACCGA TTGCCACGTG AACAGCAACA CCGGTGCGAA CGACCCGAAG
GGAGGGCATG CCTCCGCGAA CCCCTACATG CTCCGGGGGA ACTACCAGCC GACCCTGGCC
TCGACGGTCG ACATGGCCAA CCATGGCCCG GCCGAGATGT GCGGCCTCTG CCACAATCCG
TTGTCGTACG GCATTTCTTC CGCGGACCCC ACTGGCACCC AGGGTTCCAG CGGTTACAGT
TCCGGCACCA ATAACCTGCA CCTGGAGCAC GCTTTCCGGC AGGGGATCAG CGGGTACAAG
TGCTCCATGT GCCATGCGGC CAATATCCAC GGTTCTCCCC GACAGTCGAT GTTCGTCCTT
AAAACGGACC CGGCGCCGTA CATGGTCGGC TCGGACCATG TGGGCAGCTT TACCCGCAAG
GCGAACAAGA CCTACAACGG CTCCGAATGC AAGGGTGGGA TCGGAGCCTG CAGTGCTGGC
ATTCACACCC CCTGA
|
|---|
| Protein sequence | MHALKPRGST RNGWWGKVIL VVALLLGAGF VLFHHGGRLS LAATSGPNAV ATGTTSGWTG
ATNIYTQNST YATYAGSSST AYLLGTNYGF AIPTGSTING ITVDIWGFNS NTTTANRMIK
ISLTKTGNST VAGTTKTGVT LPTANGQVTQ GGAADLWGTT WTAADVNSAN FGVIIADNDT
TIGGTLSIDY VRVTVTYTPP TTLGNGATGT NATVCPGDAL QKLDGFSFTT ATGTDSITAL
TVTTTNGTAI AGMSIWDEAG TTQYFTTVNN PGTNTWSFSG GTPIPVDTTV KNYKVLVTYK
DHPTAPAGST ATTAAVTAFT PSTGVAAGTD TADTTLTLDN VPGTAAVWGT NTGGVASVTL
NWTLGAAGEN VVIVRYGANT DTTMPVDGTS YTVGSSFGTG GTVAYAGSGV TATDTVQAGT
YYYRIFEYDG CFNYAATAPW STAVTATPQN KTVAGSASAM WASPTSISVM VGYTNDDNSN
NNITIEYSSV SASTGFVTAV TTPTHPAVPY QYTIAGLTTG STYWVRVTWN DVDGVLGTSP
TVLPSIVLTQ YSPLLHNSAI LGSNKWPSGW GVTGGKYGAF SCTTCHTMKS ANIKRVRTSI
TAPFGNWSSS GTPSVSVSFT NLTSMGHDDD NHTTSNRVCE VCHNRNKYHN YNTTKNTGGK
SHNNGIDCVG CHSHNIAFKG EESKGGKACT NCHNSGKFAS ALKGSNGYHH YLQNTDSITY
GTIAQPALTG GATDTNRSCL MCHVDHDIFR PDINLNAGSG RAKNLRADIS TTPTAADTTS
YANTDFIPDA TKNGGICISC HRTAQTNLGY TQPDGSQRKP AIPYPDTVQN QIFVYMSSAH
NYTVSSTFSG TGTNSFVANC SKCHNDTLNP KSGYNAQGTS RIKFGNHTSS IPQMLTTFGA
PVTSSQKADY CFKCHGNVAP FSTTTPNINV YLSTPRYDWY STSLMTARTK NIAADFNDAA
LTHKHQVQLA AYVDKHHAGE TRAELSANKH VTCDDCHNHH GSKKGLHIQA GPRNLSPALK
GAMGVTPPTW NAWSTARAAG TTVVWPDALV PASEEWQICF KCHSSYNTNQ AGWVGTNYGG
ADLAIQLNPT YKSGHAIIGN SRVPADSPSN FAAGTPWNKN SIMTCTDCHV NSNTGANDPK
GGHASANPYM LRGNYQPTLA STVDMANHGP AEMCGLCHNP LSYGISSADP TGTQGSSGYS
SGTNNLHLEH AFRQGISGYK CSMCHAANIH GSPRQSMFVL KTDPAPYMVG SDHVGSFTRK
ANKTYNGSEC KGGIGACSAG IHTP
|
|---|
| |