Gene Gmet_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0410 
Symbol 
ID3738165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp453140 
End bp454498 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content65% 
IMG OID637777684 
ProductUDP-N-acetylmuramoylalanine--D-glutamate ligase 
Protein accessionYP_383378 
Protein GI78221631 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTT CGGGAAAGAA CATACTGGTC GTAGGCCTTG CCCGCACGGG CGTGGCGGTG 
GCCCGCTTTC TGGCGCGAAA CGGGGCGCGG GTGACCGTGA CCGACCTTCG CGACGAGTCC
GCCCTGGCCG GTCCCCTCCG GGAGCTGGCA GGACTTTCCG TGCGGTATGT GCTAGACCGC
CACGATGAGG CTGATTTTGC TGCTGCCGAC GTAGTGGTGG TGAGTCCCGG CGTCCCCCAG
GAGAGCCCCT ATCTCCAGGC GGCCCGCAGG GCCGGACGTG AGGTGATTAC CGAGATCGAA
CTGGCGTCCC GGTTCGTTAC TGTCCCCATG GTGGCCATCA CCGGGACCAA CGGCAAGACC
ACCACCACGA CCCTGACAGG GGAGATCTTC AGCGCCTGCG GGTTCCGGAC CTTCGTGGGG
GGGAACATCG GCAATCCTCT CATCGAGCTT GTAGAGGGAG GCGAGACGGT GGAACGGGTG
GTGGTGGAGA TCAGTTCCTT CCAGCTGGAA TGGATCAGCT CCTTCCGCCC GCGGGTGGCG
GTGCTCCTCA ATATCACCGA GGACCACCTG GACCGCTATG CTACGTTCCA GGAGTACATT
GACGCCAAGG TGCGGATCTT CGAGAACCAG GAATCGACTG ACTACGCCGT GCTGAACGTG
GATGATCCCA TCGTGGCCGG CATTGCCGGG CGGGTTGCCG CGACGGTATT CCCCATGAGC
CAACAGCGGG AGCTTGCCGA GGGGGTCTTC CACCGGGACG GCGTCATCAC CTTCCGGCAC
CAGGGGCGTG AGGAACGCTT CCCCACCGCC CGATTCCGGA TCACCGGAGT CCACAATATC
GAAAACATCA TGGCCTCCCT CGCCGCGACC CTCCTCCTGG GGTGCGACGC AAAACAGGCC
CTTGCGGCCG TTGAAGGGTT CGGCGGGCTC CCCCACCGGA TGGAGCTGGT GCGGGAGTTG
GCAGGCGTCC GTTACTACGA GGACAGCAAA GCCACCAACG TGGGAAGTGT GGAGAAGGCC
CTGGCCAGTT TCAATGACAT CACCCTCATT GCCGGAGGGA AGGACAAGGG GGGATCGTAT
GCACCCCTGG CCCCCCTGGT GACGGAGCGG GTGCGGCACA TGGTCCTCAT CGGCGAGGCA
AAGGAACGGA TGGCCCGGGA ACTGGGGAGC CTTACCGACA CCCGCATGGC CACGACCCTC
GAGGAAGCGG TCGAGCTGGC AGCGAGCCTC ACGGAGCCGG GAGGGGTAGT CCTCTTCTCG
CCAGCCTGCT CCAGTTTCGA CATGTTCCGT GACTACGAGG AACGGGCCCA GCGTTTCCGC
GCGGCCGTAA ACGCCCTCGG CACGGGAGAG CGCCCGTGA
 
Protein sequence
MEISGKNILV VGLARTGVAV ARFLARNGAR VTVTDLRDES ALAGPLRELA GLSVRYVLDR 
HDEADFAAAD VVVVSPGVPQ ESPYLQAARR AGREVITEIE LASRFVTVPM VAITGTNGKT
TTTTLTGEIF SACGFRTFVG GNIGNPLIEL VEGGETVERV VVEISSFQLE WISSFRPRVA
VLLNITEDHL DRYATFQEYI DAKVRIFENQ ESTDYAVLNV DDPIVAGIAG RVAATVFPMS
QQRELAEGVF HRDGVITFRH QGREERFPTA RFRITGVHNI ENIMASLAAT LLLGCDAKQA
LAAVEGFGGL PHRMELVREL AGVRYYEDSK ATNVGSVEKA LASFNDITLI AGGKDKGGSY
APLAPLVTER VRHMVLIGEA KERMARELGS LTDTRMATTL EEAVELAASL TEPGGVVLFS
PACSSFDMFR DYEERAQRFR AAVNALGTGE RP