Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0406 |
Symbol | |
ID | 3738161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 447082 |
End bp | 449055 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637777680 |
Product | penicillin-binding protein, transpeptidase |
Protein accession | YP_383374 |
Protein GI | 78221627 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTACG ACGCGGAGAA ATGGATAACT CTCCGTATCC GCTTCATCGG GGGGTTCTTC GTTCTCCTCT TTGCGTTGAC GTTCTGCCGA GCTTTTTACC TTCAGGTGAT CAAGCGCGAC TACCTTCTCA AGCTCGCCGA TCGGCAGCAC CAGAAGATTA TTCCCCTTAC GCCGGTTCGC GGGACGATCT ACGATGCGAA TGGCGCCGCC TTGGCCGTTT CGGTTGAGAT GGATTCCTGT TATGCCGAGC CAAAGTCCAT GGAGGACTTG GGCGAGGCTT CGGCGCAGTT GGCGCCAGTC CTTGGCATGC CAAAGGAGTC GATCCTGAAG AAGCTCCAGG GGAACAAGAA CTTCGTCTGG CTCCAACGGC GGCTTACCCC CGATGTGGTG AAGCGAATCC GGGACCTGGA TCTCGAGGGG ATCGGTTTCG TCAAGGAGAC AAAGCGCTTT TATCCCAACT CAGAGGTGGC TGCCCACGTG ATCGGGTTCA CCGGCCTGGA CCCCGAGGGA CTGGAGGGAG TAGAGCGACG CTATGACTCT ACGATCCTTG GTGGAACCGG CTATCTGGTG ACCGAGCGGG ACGCCCTGGG ACGCAACGTG GCCCTCAAGG GGACGGTGAT CCAGAATGGG GCCATGGGGC ACGACGTCAC CCTTACCCTG GACAAGAACA TCCAGTATAT CGCCGAGAAG GAACTGGCCC AGGCGGTGGA AAAAAGCGGA GCCCGCGCCG GTACCGCGCT CGTGATGGAT CCCCACACCG GCAAGGTGCT GGCCATGGCA AATTATCCGA CCTTCAATCT GAACTCCCAT GCCTCCTACT CTCCGCAGGT ATGGCGTAAC CGCGCCGTTG CCGACAGCTA TGAGCCCGGT TCCACCTTCA AGACCTTCCT GGTCGCCGCC GCGTTGGAGG AAAAGGTGAT CCGGCCCGGC GACGGCATAA ATTGCGAGGG AGGAAGCTAC GCGATCGGCG GAAGGACGAT CCACGACACG CACAAGTACG GCCGGCTCAG TATCGCCGAG GTCCTCAAGT ATTCCAGCAA TATCGGCGCC GCCAAAATCG GGAGCCGCCT GGGACCGTCA CGCTTGTACA CCTATCTGAA GAATTTTGGA ATCGGCGACA GGAGTGGGGT TGATCTGCCC GGTGAAGTGG GGGGAAGTCT ACGGCCATGG AGCCAGTGGT ACGGCATCGA TCTCGCCACT ATTTCGTTTG GTCAGGGTGT GACGACATCG TCGCTGCAAC TGGCCTCCGC CGTATCGGCC ATTGCCAACG GCGGTGTTCT CATGAAACCC TATCTGGTCG AGAAGATCAC CGACAGCGAA GGGAATGTAG TCACGTCTTT CGAGCCACAG GTGCGCCGAC GGGTCATTTC CCCTGAAACG GCCAAAACGG TTTCCCGGAT GATGGAAGGG GTTGCCGCCG AGGGGGGGAC CGGAACCAAT GCCTCGGTTG AAGGCTACCG GGTTGCCGGC AAGACCGGCA CTGCGCAGAA GGTGGACCCG GTCACCCACG GGTACTCCGC CACGAAACGG ACCGCGTCCT TCATCGGATT TGTCCCCGCA GACCGTCCCC GAATCACCAT TCTTGTGGTG ATTGATGAGC CGAAGACAAG CCCCTATGGC GGTGTGGTGG CCGCTCCAGC TTTCAGCAGC ATCGCGTTGC AGACCCTCTG CTACCTTAAA GTTCCGCCCG ACACCGTCGT CAGGAGCAAG CCGAAGACAG TGGAAGCCAA GGCAATTCCG GAGGCCGCGG AGGCCACCGA GGCCGCCGAA GGGGCGATCG TCGAGGAGGG GGAGGGGATT GTGATGCCCA ACTTCCGGGG GATGAGCATG CGCCAGACGC TCAAGGTTAT GGAAGAGAAG GGGCTCAACG TACGTCTTCA CGGAAGCGGG CGGGCCATGG AGCAGAGCCC CCTTCCCGGG CACCGGATCA AGCCCAGCGA CCAGGTTTGG GTCAAGTTCA CGCCGACGGC GTAA
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Protein sequence | MRYDAEKWIT LRIRFIGGFF VLLFALTFCR AFYLQVIKRD YLLKLADRQH QKIIPLTPVR GTIYDANGAA LAVSVEMDSC YAEPKSMEDL GEASAQLAPV LGMPKESILK KLQGNKNFVW LQRRLTPDVV KRIRDLDLEG IGFVKETKRF YPNSEVAAHV IGFTGLDPEG LEGVERRYDS TILGGTGYLV TERDALGRNV ALKGTVIQNG AMGHDVTLTL DKNIQYIAEK ELAQAVEKSG ARAGTALVMD PHTGKVLAMA NYPTFNLNSH ASYSPQVWRN RAVADSYEPG STFKTFLVAA ALEEKVIRPG DGINCEGGSY AIGGRTIHDT HKYGRLSIAE VLKYSSNIGA AKIGSRLGPS RLYTYLKNFG IGDRSGVDLP GEVGGSLRPW SQWYGIDLAT ISFGQGVTTS SLQLASAVSA IANGGVLMKP YLVEKITDSE GNVVTSFEPQ VRRRVISPET AKTVSRMMEG VAAEGGTGTN ASVEGYRVAG KTGTAQKVDP VTHGYSATKR TASFIGFVPA DRPRITILVV IDEPKTSPYG GVVAAPAFSS IALQTLCYLK VPPDTVVRSK PKTVEAKAIP EAAEATEAAE GAIVEEGEGI VMPNFRGMSM RQTLKVMEEK GLNVRLHGSG RAMEQSPLPG HRIKPSDQVW VKFTPTA
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