Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0213 |
Symbol | |
ID | 3739675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 246743 |
End bp | 247975 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637777489 |
Product | L,L-diaminopimelate aminotransferase |
Protein accession | YP_383184 |
Protein GI | 78221437 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0427359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000000000342652 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAA TCAACGACAA CTACCTGAAA CTGAAGGCCG GCTACCTCTT TCCCGAGATC GGCCGCCGCG TGCGGGAGTT TTCCGCCGCC AACCCCGAGG CCAAGGTCAT CCGGCTCGGC ATCGGCGACG TGACCCGCCC CCTGGCCCCG GCCATCATCA AGGCGTTCCA CGACGCCGTG GACGATCTGG CCACCATCGA CAACTTCGCC GGCTATGGCC CGGAGCAGGG GTACGACTGG CTCATCAACG CCATCATCGA GAAGTCCTAC AAGCCCCTGG GCGTTTCCCT CAAGACCGAG GAGATGTTCA TCTCCGACGG CTCCAAGTGC GACTGCGCCA ACATCCTCGA CATCTTCGCC CTCGACAACG TCGTTGCCAT CGGCGATCCG GTCTACCCGG TCTACAACGA CACCAACGTC ATGATCGGCC GCACCGGCGA TGCCGACGAG AAGGGGTACT ACAAGGGGAT CGTCTACATG CCCTGCACCG AGGCGAACGG CTTCATCCCG TCGCTCCCCA CGGAAAAAGT GGACATCATC TACCTCTGCT TCCCCAATAA TCCCACCGGC ACCGTGGCCA CCAAGGCCGA GCTGAAAAAG TGGGTCGACT ACGCCAACGC CAACGATGCC GTCATCTTCT TCGACGCCGC CTATGAGGCC TTCATCACCG ATCCCGCAAT CCCACACTCC ATCTACGAGA TCGAAGGGGC CAAGAAGTGC GCCATCGAAT TCCGCTCCTT CTCCAAGACC GCCGGTTTCA CCGGTGTCCG CTGCGGCCTC GTGGTCGTTC CGGAAGAGGT GATGGGCACC ACGCCGACGG GGGAGAAGTA CAGCTTCAAC AAGCTCTGGC TCCGCCGCAC CACCACCAAG TTCAACGGCG CCTCCTACCC GGTCCAGAAG GCCGCCGCCG CCGTCTACTC CGACGAGGGA TGGAAGCAGA ACAAAGAGAT CATCGACTAC TACATGGAGA ACGCCCGGAT CATCCGCGAA GGCCTCGCCG CCGCCGGCCT TACAGTCTAC GGCGGGGTCA ACGCCCCCTA CATCTGGCTG AAAACGCCGG GCGGCATGAG CAGCTGGGAC TTCTTCGACA AACTTCTCAC TGAGTGCAAC GTCGTGGGGA CGCCGGGAAG CGGCTTCGGC CCCAGCGGCG AAGGGTTCTT CCGGCTCTCG GCCTTCGGCC ATCGCGAGAA TGTGATTGAG GCGGTGGAGA GGATAAAGAA GAATCTGAAG TAG
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Protein sequence | MAKINDNYLK LKAGYLFPEI GRRVREFSAA NPEAKVIRLG IGDVTRPLAP AIIKAFHDAV DDLATIDNFA GYGPEQGYDW LINAIIEKSY KPLGVSLKTE EMFISDGSKC DCANILDIFA LDNVVAIGDP VYPVYNDTNV MIGRTGDADE KGYYKGIVYM PCTEANGFIP SLPTEKVDII YLCFPNNPTG TVATKAELKK WVDYANANDA VIFFDAAYEA FITDPAIPHS IYEIEGAKKC AIEFRSFSKT AGFTGVRCGL VVVPEEVMGT TPTGEKYSFN KLWLRRTTTK FNGASYPVQK AAAAVYSDEG WKQNKEIIDY YMENARIIRE GLAAAGLTVY GGVNAPYIWL KTPGGMSSWD FFDKLLTECN VVGTPGSGFG PSGEGFFRLS AFGHRENVIE AVERIKKNLK
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