Gene Gmet_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0172 
Symbol 
ID3739653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp201482 
End bp202882 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content68% 
IMG OID637777449 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_383144 
Protein GI78221397 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATAA CCGAACTCTG GGCCCTCATC CCTCTTCTGA TCCTCGCCTG CGGGAGCGTC 
TTCGTGCTCA TGCTCGGGGC AATCGTGCCG GGACGGTGCG GAACCGTCAT CGGCGTTGCC
GTCTGCGCCG GCACGGCTCT CTGGGCGATG CTGGCTCCGC CGCAGCCCCT GGCGCCGCCG
ACTCTGGGAG TGACCGTCAC CCCCTTTACC CGCTTCTTCC TCGTATTTTT CGCCGTGACG
GCAGGCTTGT CGCTCCTCCT GGCCCGAGAC CATGCGGCGC GGCAGGGGCT TAAGGGGGAG
GAGTACCCGG CCACGATCCT CTTCGGCACC TTCGGCATGG GTGTGGTGGC GAGCGCGGCC
AACTTCCTGA CCCTCTTCCT GGGGCTGGAG GCCCTCACCT TCGCCTTCTA CATTCTGGTG
GCCTACGACC ACAACCGCCC GGCGTCCGGG GAGGCAGGGC TCAAGTACCT CCTCATGGGG
GCCGTGTCGG CGGCCTTTGT GGCATTCGGC ATCGCGCTCC TCTACGGGGC CACGGGGACC
CTGGAGATTA GCCGGGCCGT GGCCGCCTCG GCAGCCGGGG GAGGGATCGC CCTGGCGGGA
TGGGGGCTCC TCTTGGCGGG GCTCGCCTTC AAGATATCCC TGGCACCGGC CCACCTCTGG
ACCCCGGACA TCTACCAGGG GGGGCCGACG CCGGTGGTGG CCTTCCTCGC CTCCGGCTCC
AAGGGGGCGG CCATCGCCCT TTTCCTGCTC ATTCTCTCCC CCCTCGGAAC GCTCGGCACC
CTGCGGGCGC CCCTCTGGGG GCTGGCGTTC CTCTCCATGA CCGTCGGGAA CCTGGCGGCA
CTCCTGCAGC CCAACGTGAA GCGGATGCTC GCCTACTCAT CCGTGGCCCA GATGGGGTAC
GTGGCCCTGG CGCTCCTGTC GGGGGGACGG GGGTACGAGG CTGCGGCGTT TTATGCCGTG
GCCTACGGAG CCATGGTCCT GGCTGCCTTC GGCGCCCTTG CCTCCCTGGA GGGAGAAACG
CCGCTGGAAC AGGTGGATGA CCTCCGGGGG CTCGGCTATC ACCGCCCCTT CCAGGGGGTG
GTGCTGGCCG TGGCCATGCT CGCCCTGGCA GGGATTCCTC CAACGGTGGG CTTTGTGGGA
AAGTTCGCCA TCTTCTTCGC GGCCCTGAAA GGGGGAGAGG CTCCCCTGGC GGTCATCGGC
ATCCTCACGG CGGCGGCCTC GGCCTACTAC TACCTGCGGG TGGTGGTGAA CCTCTACATG
AAACCGGCGG ATGAGACGGG CTCCGGCCAA CGCCCCACCG TTGCGGAAGC GCTCTCCCTT
GGCATTGCAG CCCTCGCCAT CTTCATCCTC GGCATCTGGC CCGGCCCCCT CTTCGACCTG
GCAGCCGCGA TTCTTCGCTA G
 
Protein sequence
MTITELWALI PLLILACGSV FVLMLGAIVP GRCGTVIGVA VCAGTALWAM LAPPQPLAPP 
TLGVTVTPFT RFFLVFFAVT AGLSLLLARD HAARQGLKGE EYPATILFGT FGMGVVASAA
NFLTLFLGLE ALTFAFYILV AYDHNRPASG EAGLKYLLMG AVSAAFVAFG IALLYGATGT
LEISRAVAAS AAGGGIALAG WGLLLAGLAF KISLAPAHLW TPDIYQGGPT PVVAFLASGS
KGAAIALFLL ILSPLGTLGT LRAPLWGLAF LSMTVGNLAA LLQPNVKRML AYSSVAQMGY
VALALLSGGR GYEAAAFYAV AYGAMVLAAF GALASLEGET PLEQVDDLRG LGYHRPFQGV
VLAVAMLALA GIPPTVGFVG KFAIFFAALK GGEAPLAVIG ILTAAASAYY YLRVVVNLYM
KPADETGSGQ RPTVAEALSL GIAALAIFIL GIWPGPLFDL AAAILR