Gene Gmet_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0153 
Symbol 
ID3739634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp183479 
End bp185854 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content66% 
IMG OID637777430 
Producttrifunctional NADH dehydrogenase I subunit B/C/D 
Protein accessionYP_383125 
Protein GI78221378 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases
[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit
[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGA CTGAAATCCC ACAGAACATA GTGCTGACCC GCCTGGACGA CCTCATCAAC 
TGGGGGCGCG CCAATTCCCT CTGGCCCATG TTCTTTGGGC TCTCCTGCTG CTTCGTGGAG
ATGATGACCT CCTTCACCTC CCGCTACGAC ATCTCCCGCT TCGGGGCCGA GGTGCTCCGG
GGGACTCCCC GGGAGGCGGA CCTGATGGTC ATCGCCGGCA CGGTCTTCAA GAAGATGGCC
CCCTCCATCC TTCGCCTCTA CGAGCAGATG GCCGAGCCCA AGTGGGTCAT CTCCATGGGG
AGCTGCGCCA ACTCCGGCGG CATGTACGAC GTCTACAGCG TGGTCCAGGG GGTGAACCAG
ATCATCCCGG TGGATGTCCA CGTCCCCGGC TGCCCGCCGC GCCCCGAGGC GTTCCTCCAG
GGGGTGATGC TCCTGCAGGA GAAGATCAGG CGGGAAGAGC GCCCCGCACG CAAAGTTCTT
CACATGGCCG GCGGGACCGA GGGGACCACC CGGCCGGTCC TCGTGGACGG GGTGACGAAA
TCCCGCGACA CCCGCGGGCC GGGGATGGAG GGAATCGCCA TTCGCGGCAC CCCGGTCCAG
CATCCCCGCT TCTGGATGTC CCGTTCCGAC GAGATGTGGC GCCCTCCCGC GCCGCGGCAC
GACTATCCCG ACTTCGGCCT CGCCGGAGAA CTGGAGACGA TCTTCGGCGG CCGGGTGGCG
GTGGAGCAGG CCGCCACCGA CATGCTCACC TACCGCTGCC CTCCGGAGCT GGTGCCCGAG
GTGCTGCGCC ACCTGAAGAG CCGAAGCTCC GCCCCCTTCC GGCGCCTGGA GGACGTGGTC
TGCGTGGACG AATCGTGCCG CCGGGAGCGG GAGCGGTTCC CGGACTTCAC CGTCAACTAC
CACCTCCTGA ACTTCGACAT CCCCGGCCAC CTCCGGATCA AGACGGAGCT GATGGGGGAG
ACCCCGGAGC TTCCGAGCGC GACCGGCGTC TTCCCCGCGG CCGACTGGTA CGAGCGGGAG
GCCTTCGACA TGTACGGCAT CCGCTTCGCC GGGCATCCGA ACCTGCGCCG CATCCTCATG
CCCCCCGACT GGGAGGGGCA TCCCCTGCGC AAGGAGCACC CCTTCCGGGC CACGGAGATG
CCTCCCTACA CCACCGACGA TGCACGGCGC CACCAGGCCC TGCCGGCCAG CGATTTTTTC
GATAGAATCG ACGAGGAGAC CTTGATCATC AACCTGGGCC CCCAACATCC GGGGACCCAC
GGGATCATCC GCTTCATCCT CAAGCTGGAC GGCGAGGAGA TCGTGGACAT GGACACCGAC
ATCGGCTACC ACCACCGGGG GGCCGAGAAA ATCGGCGAAC GCCAGCACTG GAACCAGTTC
ATCCCCTACA CCGACCGGAT CGACTACCTG GCCGGGGTCC AGAACAACCT CGCCTACGTG
AACAGCGTGG AGCGGCTCTG CGGTATCACC GTGCCGGACC GGGCCATCAC CATCCGGGTC
ATGCTGGCGG AGCTCTTCCG GATCGCCAGC CATCTGGTCT GGCTCGGCAC CTTTGCCGCC
GACGTGGGGG CCATGACCCC GGTCTTCTAC ACCTTCACCG ACCGGGAGAA GATCTTCGAC
ATCATCGAGA TGGTCACCGG CGGCCGGATG CACCCCTCCT GGTTCCGGAT CGGCGGCGTG
ACCGAGGATC TCCCCGAGGG GTGGGACGGG GCGGTGAAGG AATTCCTCGA CTGGATGCCG
GGCCGGCTCA AGGAGTACGA AGACCTCCTG AAGGAAAACC CAATCTTCAA GGCGCGGCTG
AAAGGGGTCG GCGTCATTAC GAAAGACGAG GCCATGGAGT GGGGAATCAC CGGCCCGAAC
CTTCGGGCCT GCGGCATGGC GTGGGACCTG CGGAAGAAAA TCCCCTACAA CGGCTACCAG
CACTTCCACT TCGAGATCCC CACGGAGGAA GGGGGGGACT GCTGGGCGCG GTACCGGATC
AGGGTCGAGG AGATCCGCCA GTCGCTCCAC ATCGTGGCGC AGTGCCGGAA GGAGATGCCC
GCCGGCCGCT GGATCACCGA CGACTACCGC TATGTCCTCC CCAAGAAGAG GGACACGCTC
CACGACATCG AGTCCCTCAT CCACCACTTC ATCAACGCCA CCCGGGGGAT GGCGCCCCCC
AGGGGGGAAA ACTACAGCGC CATCGAGGCT CCCAAGGGGG AAAACGGCTA CTTCGTGGTG
AGCGACGGCC TCAACGTCCC GTACCGGGTG CGGATCAAGA CCCCGAGCTT TCCCCACATC
CAGGCGCTCC CCCTCATGAG CCGAGGGTGG CTCGTGGCGG ATTTTCTCGC CATCATCGGG
TCCATCGACT TTGTACTGGC GGATCTGGAC CGGTGA
 
Protein sequence
MEETEIPQNI VLTRLDDLIN WGRANSLWPM FFGLSCCFVE MMTSFTSRYD ISRFGAEVLR 
GTPREADLMV IAGTVFKKMA PSILRLYEQM AEPKWVISMG SCANSGGMYD VYSVVQGVNQ
IIPVDVHVPG CPPRPEAFLQ GVMLLQEKIR REERPARKVL HMAGGTEGTT RPVLVDGVTK
SRDTRGPGME GIAIRGTPVQ HPRFWMSRSD EMWRPPAPRH DYPDFGLAGE LETIFGGRVA
VEQAATDMLT YRCPPELVPE VLRHLKSRSS APFRRLEDVV CVDESCRRER ERFPDFTVNY
HLLNFDIPGH LRIKTELMGE TPELPSATGV FPAADWYERE AFDMYGIRFA GHPNLRRILM
PPDWEGHPLR KEHPFRATEM PPYTTDDARR HQALPASDFF DRIDEETLII NLGPQHPGTH
GIIRFILKLD GEEIVDMDTD IGYHHRGAEK IGERQHWNQF IPYTDRIDYL AGVQNNLAYV
NSVERLCGIT VPDRAITIRV MLAELFRIAS HLVWLGTFAA DVGAMTPVFY TFTDREKIFD
IIEMVTGGRM HPSWFRIGGV TEDLPEGWDG AVKEFLDWMP GRLKEYEDLL KENPIFKARL
KGVGVITKDE AMEWGITGPN LRACGMAWDL RKKIPYNGYQ HFHFEIPTEE GGDCWARYRI
RVEEIRQSLH IVAQCRKEMP AGRWITDDYR YVLPKKRDTL HDIESLIHHF INATRGMAPP
RGENYSAIEA PKGENGYFVV SDGLNVPYRV RIKTPSFPHI QALPLMSRGW LVADFLAIIG
SIDFVLADLD R