Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0153 |
Symbol | |
ID | 3739634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 183479 |
End bp | 185854 |
Gene Length | 2376 bp |
Protein Length | 791 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637777430 |
Product | trifunctional NADH dehydrogenase I subunit B/C/D |
Protein accession | YP_383125 |
Protein GI | 78221378 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C [TIGR01962] NADH dehydrogenase I, D subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGAGA CTGAAATCCC ACAGAACATA GTGCTGACCC GCCTGGACGA CCTCATCAAC TGGGGGCGCG CCAATTCCCT CTGGCCCATG TTCTTTGGGC TCTCCTGCTG CTTCGTGGAG ATGATGACCT CCTTCACCTC CCGCTACGAC ATCTCCCGCT TCGGGGCCGA GGTGCTCCGG GGGACTCCCC GGGAGGCGGA CCTGATGGTC ATCGCCGGCA CGGTCTTCAA GAAGATGGCC CCCTCCATCC TTCGCCTCTA CGAGCAGATG GCCGAGCCCA AGTGGGTCAT CTCCATGGGG AGCTGCGCCA ACTCCGGCGG CATGTACGAC GTCTACAGCG TGGTCCAGGG GGTGAACCAG ATCATCCCGG TGGATGTCCA CGTCCCCGGC TGCCCGCCGC GCCCCGAGGC GTTCCTCCAG GGGGTGATGC TCCTGCAGGA GAAGATCAGG CGGGAAGAGC GCCCCGCACG CAAAGTTCTT CACATGGCCG GCGGGACCGA GGGGACCACC CGGCCGGTCC TCGTGGACGG GGTGACGAAA TCCCGCGACA CCCGCGGGCC GGGGATGGAG GGAATCGCCA TTCGCGGCAC CCCGGTCCAG CATCCCCGCT TCTGGATGTC CCGTTCCGAC GAGATGTGGC GCCCTCCCGC GCCGCGGCAC GACTATCCCG ACTTCGGCCT CGCCGGAGAA CTGGAGACGA TCTTCGGCGG CCGGGTGGCG GTGGAGCAGG CCGCCACCGA CATGCTCACC TACCGCTGCC CTCCGGAGCT GGTGCCCGAG GTGCTGCGCC ACCTGAAGAG CCGAAGCTCC GCCCCCTTCC GGCGCCTGGA GGACGTGGTC TGCGTGGACG AATCGTGCCG CCGGGAGCGG GAGCGGTTCC CGGACTTCAC CGTCAACTAC CACCTCCTGA ACTTCGACAT CCCCGGCCAC CTCCGGATCA AGACGGAGCT GATGGGGGAG ACCCCGGAGC TTCCGAGCGC GACCGGCGTC TTCCCCGCGG CCGACTGGTA CGAGCGGGAG GCCTTCGACA TGTACGGCAT CCGCTTCGCC GGGCATCCGA ACCTGCGCCG CATCCTCATG CCCCCCGACT GGGAGGGGCA TCCCCTGCGC AAGGAGCACC CCTTCCGGGC CACGGAGATG CCTCCCTACA CCACCGACGA TGCACGGCGC CACCAGGCCC TGCCGGCCAG CGATTTTTTC GATAGAATCG ACGAGGAGAC CTTGATCATC AACCTGGGCC CCCAACATCC GGGGACCCAC GGGATCATCC GCTTCATCCT CAAGCTGGAC GGCGAGGAGA TCGTGGACAT GGACACCGAC ATCGGCTACC ACCACCGGGG GGCCGAGAAA ATCGGCGAAC GCCAGCACTG GAACCAGTTC ATCCCCTACA CCGACCGGAT CGACTACCTG GCCGGGGTCC AGAACAACCT CGCCTACGTG AACAGCGTGG AGCGGCTCTG CGGTATCACC GTGCCGGACC GGGCCATCAC CATCCGGGTC ATGCTGGCGG AGCTCTTCCG GATCGCCAGC CATCTGGTCT GGCTCGGCAC CTTTGCCGCC GACGTGGGGG CCATGACCCC GGTCTTCTAC ACCTTCACCG ACCGGGAGAA GATCTTCGAC ATCATCGAGA TGGTCACCGG CGGCCGGATG CACCCCTCCT GGTTCCGGAT CGGCGGCGTG ACCGAGGATC TCCCCGAGGG GTGGGACGGG GCGGTGAAGG AATTCCTCGA CTGGATGCCG GGCCGGCTCA AGGAGTACGA AGACCTCCTG AAGGAAAACC CAATCTTCAA GGCGCGGCTG AAAGGGGTCG GCGTCATTAC GAAAGACGAG GCCATGGAGT GGGGAATCAC CGGCCCGAAC CTTCGGGCCT GCGGCATGGC GTGGGACCTG CGGAAGAAAA TCCCCTACAA CGGCTACCAG CACTTCCACT TCGAGATCCC CACGGAGGAA GGGGGGGACT GCTGGGCGCG GTACCGGATC AGGGTCGAGG AGATCCGCCA GTCGCTCCAC ATCGTGGCGC AGTGCCGGAA GGAGATGCCC GCCGGCCGCT GGATCACCGA CGACTACCGC TATGTCCTCC CCAAGAAGAG GGACACGCTC CACGACATCG AGTCCCTCAT CCACCACTTC ATCAACGCCA CCCGGGGGAT GGCGCCCCCC AGGGGGGAAA ACTACAGCGC CATCGAGGCT CCCAAGGGGG AAAACGGCTA CTTCGTGGTG AGCGACGGCC TCAACGTCCC GTACCGGGTG CGGATCAAGA CCCCGAGCTT TCCCCACATC CAGGCGCTCC CCCTCATGAG CCGAGGGTGG CTCGTGGCGG ATTTTCTCGC CATCATCGGG TCCATCGACT TTGTACTGGC GGATCTGGAC CGGTGA
|
Protein sequence | MEETEIPQNI VLTRLDDLIN WGRANSLWPM FFGLSCCFVE MMTSFTSRYD ISRFGAEVLR GTPREADLMV IAGTVFKKMA PSILRLYEQM AEPKWVISMG SCANSGGMYD VYSVVQGVNQ IIPVDVHVPG CPPRPEAFLQ GVMLLQEKIR REERPARKVL HMAGGTEGTT RPVLVDGVTK SRDTRGPGME GIAIRGTPVQ HPRFWMSRSD EMWRPPAPRH DYPDFGLAGE LETIFGGRVA VEQAATDMLT YRCPPELVPE VLRHLKSRSS APFRRLEDVV CVDESCRRER ERFPDFTVNY HLLNFDIPGH LRIKTELMGE TPELPSATGV FPAADWYERE AFDMYGIRFA GHPNLRRILM PPDWEGHPLR KEHPFRATEM PPYTTDDARR HQALPASDFF DRIDEETLII NLGPQHPGTH GIIRFILKLD GEEIVDMDTD IGYHHRGAEK IGERQHWNQF IPYTDRIDYL AGVQNNLAYV NSVERLCGIT VPDRAITIRV MLAELFRIAS HLVWLGTFAA DVGAMTPVFY TFTDREKIFD IIEMVTGGRM HPSWFRIGGV TEDLPEGWDG AVKEFLDWMP GRLKEYEDLL KENPIFKARL KGVGVITKDE AMEWGITGPN LRACGMAWDL RKKIPYNGYQ HFHFEIPTEE GGDCWARYRI RVEEIRQSLH IVAQCRKEMP AGRWITDDYR YVLPKKRDTL HDIESLIHHF INATRGMAPP RGENYSAIEA PKGENGYFVV SDGLNVPYRV RIKTPSFPHI QALPLMSRGW LVADFLAIIG SIDFVLADLD R
|
| |