Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0081 |
Symbol | |
ID | 3739407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 98843 |
End bp | 100096 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637777359 |
Product | IS204/IS1001/IS1096/IS1165 transposase |
Protein accession | YP_383055 |
Protein GI | 78221308 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00660659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTATCA AGACTGTACT GAACAAGTTC GAGCGTTTCA AGTCCTTCAT TTACGGAGAT TGCCGACTGG CGAAAGTCGG CGGCTCAGAA GCACTGGTCA TTGACATCAA GGCTCGTCGC AACAGCAAGC CCGAATGCCC GGAATGTGGC AAGCGAGGCA AGACATACGA CACGCAACCG GCCCGACTGT TCGAGTATGT GCCGATCTGG GCGTTCAAGG TCTTCTTTCG CTACGCTCCC CGTCGGGTTC TGTGCCCAAT CCATGGGGTA AAGGTTGAAT CCCTCCCCTG GGGGTATGGC AAAGAGCAAA TGACGATCTC GTACCAGGTC TATCTTGCCC GGTGGGCTCG GCGACTCTCC TGGAAGGAAG TTGCCGAAAT CTTTAAGACC AGTTGGGACA GCATCTTTCG GGCGGTGCAG TATGCTGTCG ATTACGGCCT GGCAAACAGA AACCTTGATG GCGTTACGGA AATCGGTGTT GATGAAATTG CCGTCTTCAA GGGCCATCAG TATCTTACGA TGGTCTATCA GCTCAATGCC GGCGTCAGGC GTCTTCTCTG GTGTGGTCCG CAACGTCGGA TAAGAACGCT ACTGCGCTTC TTTCGGGAAT TCGGCAAAGA ACGCAGCGCC AAGCTCAAGT ATGTCTGCAG CGACATGTGG GCACCGTATC TCAAGGTTAT CGCCAAGCGG GCACCCAATG CCGTGAACAT CCTCGACCGC TTCCACATCA TGCGGAAGTT TAACGAAGCG ATTGACGAGG TTCGGCGCAC CGAAGCCAAG GAGTTCAAGG CCGCCAAGCA GGAGAACGTC CTGGAAAAGG GCCGTTGGTT GCTGCTGAAA CGGCCGGAAA ATCTGTCCGA GAAGCAGACG TCACGATTGG GAGATTTGCT CAAGCTCAAC CTCTCATCAA TCAAGGCATA TCTGCTGCGC GAGGACTTTC AGCAGTTCTG GGACTACCAG CGGTCTGACT TTGCTGGCAA GTTCCTCGAC GACTGGGTCA TCAGGACAAT GCAAACTGAC CTGGAACCGA TGAAGAAGGT TGCCAGGATG TTACGCAACC ACAAACCGAT GATTCTCAAC TGGTTCAAGG CAAAAGGCCG ACTTTCCAGC GGCGCGGTAG AGGGTCTGAA CCTCAAAGCA AAACTGACTA TCAGAAAAGC GTACGGTTTC CGAACCATCA AGTGCCTGCA AGTGGCGCTA TATCACACAC TTGGCGACTT GCCAGAACCC CTGTGTCACC ACAGATTCTG CTAA
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Protein sequence | MLIKTVLNKF ERFKSFIYGD CRLAKVGGSE ALVIDIKARR NSKPECPECG KRGKTYDTQP ARLFEYVPIW AFKVFFRYAP RRVLCPIHGV KVESLPWGYG KEQMTISYQV YLARWARRLS WKEVAEIFKT SWDSIFRAVQ YAVDYGLANR NLDGVTEIGV DEIAVFKGHQ YLTMVYQLNA GVRRLLWCGP QRRIRTLLRF FREFGKERSA KLKYVCSDMW APYLKVIAKR APNAVNILDR FHIMRKFNEA IDEVRRTEAK EFKAAKQENV LEKGRWLLLK RPENLSEKQT SRLGDLLKLN LSSIKAYLLR EDFQQFWDYQ RSDFAGKFLD DWVIRTMQTD LEPMKKVARM LRNHKPMILN WFKAKGRLSS GAVEGLNLKA KLTIRKAYGF RTIKCLQVAL YHTLGDLPEP LCHHRFC
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