| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0063 |
|---|
| Symbol | |
|---|
| ID | 3739679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 77504 |
|---|
| End bp | 78559 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637777341 |
|---|
| Product | TrkA family potassium uptake protein |
|---|
| Protein accession | YP_383037 |
|---|
| Protein GI | 78221290 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCCG TACGCCATTT TAAAATTTCC ATAGCTGTTC TGCTGCTCCT CGTCTCTGTC
GGGACGGCCG GCTACATGGC CATTGAGGGG TGGCAGTTCC TCGACGCTCT CTACATGACG
GTCATCACCC TCGGCACCGT GGGTTTCAAG GAGGTCCACG ACCTAAGCAA TGCGGGGAAG
ATATTCACCA TCGGGTTGAT AATTTTCGGG GTGAGCGTTC TCGGCTACAT CGTCGGCAGT
CTCGCCCAGA TCATGTTCGA GGGGCAGATA CAGCGGATCA TCGGGAGGAA GAAGGTGGAG
CGAAAGATAG AGGCCCTGCA TGACCACTAC ATCATCTGCG GCTTTGGCCG GATCGGCGCC
CTCATCTGCC GGGAATTCGC GGCCAAGCCG ATGCCGTTTC TGGTCATCGA GAAGCATCCG
GAGGTGCACG AGAAACTGCA CCATGAGGAG TACCTCCACA TCCGGGGCGA CGCCACCGAG
GACGAGACGC TGCTGCGGGC CGGGATCAAG CGGGCCAAGG GGCTGATCTC GGTGGTCACC
TCCGATACGG AGAACGTCTA CATAACCCTC ACGGCCCGGG GGCTCAACCC CGACCTCTTT
ATTCTGGCCC GCTCCGGCGA GGAGGGGTCC GAACTCAAGC TCAAGCGGGC CGGCGCCAAC
AAGGTGGTTT CGCCGTACGT CATCGGCGGG AGCCGGATGG CCCAGGCGAT CCTTCGCCCC
AACGTGGTGG ATTTCATCGA GATCGCCACG GGCCGGGAGC ACCTGGATCT TCAGATGGAG
GAGATTCAAA TTCCCGAGAA ATCAGCCTTT ATTGGCGAGA ACCTGGTAAC TTCCGGATTC
CGCAAGGAGA CCGGCGTCAT CATTGTGGGG ATAAAAAAGG CCTCGGGCAA GATGGTTTTC
AACCCGAATC CCCACACCAA GATAGAAGCC CTCGACACCC TTATCGTCCT CGGCGAACCG
GTGGCTATTA CAAAGCTGGA GCAACTGGTC GCCTGCGAAT CGTGCGCCGA TACGATCATC
AAAAAACACC GAAAAGAGCA CCCCGATCAT GTCTAA
|
|---|
| Protein sequence | MDPVRHFKIS IAVLLLLVSV GTAGYMAIEG WQFLDALYMT VITLGTVGFK EVHDLSNAGK
IFTIGLIIFG VSVLGYIVGS LAQIMFEGQI QRIIGRKKVE RKIEALHDHY IICGFGRIGA
LICREFAAKP MPFLVIEKHP EVHEKLHHEE YLHIRGDATE DETLLRAGIK RAKGLISVVT
SDTENVYITL TARGLNPDLF ILARSGEEGS ELKLKRAGAN KVVSPYVIGG SRMAQAILRP
NVVDFIEIAT GREHLDLQME EIQIPEKSAF IGENLVTSGF RKETGVIIVG IKKASGKMVF
NPNPHTKIEA LDTLIVLGEP VAITKLEQLV ACESCADTII KKHRKEHPDH V
|
|---|
| |