| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0024 |
|---|
| Symbol | |
|---|
| ID | 3739601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 31850 |
|---|
| End bp | 32884 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637777303 |
|---|
| Product | 3-deoxy-7-phosphoheptulonate synthase |
|---|
| Protein accession | YP_382999 |
|---|
| Protein GI | 78221252 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.14864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGATCG TCATGATCCA CAAGGCTGGT CCGAAACAGA TCGAGGCAGT TGTGAAGGCG
GTGGAAACCA TGGGGCTTAC GGCGGCGCCG ATTCCGGGGA GCGAGCGGAC CGCCATCGGG
GTCCTCGGCA ACAAAGGGTA CGTGGATGAC ACCACCATCA GGGACCTCCC CGGCGTCCAG
GAAGTGATCC ACGTCTCCAA GCCCTACAAG CTCGTCTCCC GCGACTTCCA TCCCCGCAAC
ACCATCGTGA AGGTCTGTGG CATCTCCATC GGCGAGGGGA AACGGCCGGT GGTGGTGGCC
GGCCCCTGCG CGGTGGAAGG GGAGGAGCAG ATCCTGAAGA CCGCCCGGGC CGTCAAGAAG
GCTGGGGCGG ATCTTCTCCG TGGAGGGGCG TTCAAGCCCC GCACCGGCCC CCATACCTTC
CAGGGAATGC GGGAAGAGGG CCTGAAGCTC CTGGCCAAGG CCCGGGAGGC AACAGGACTT
CCCATCGTCA CCGAAGTCAT GAGTCCCGAC ACGGTGGGGC TCGTGGCGGA ATACGCCGAC
CTCCTCCAGG TGGGTGCCCG CAACATGCAG AATTTCGAAC TCCTCAAGGA GCTTGGCCGC
ATCCAGAAGC CGGTCCTGCT CAAGCGGGGC ATGAGCGCAA CCATCGAAGA ATTCCTGGCC
GCCGCCGAAT ACATCCTGGC CGAGGGAAAC CCCCACGTGA TCCTCTGCGA GCGGGGGATC
AGGACCTTTG AGACCGCCAC CCGCAACACC CTGGACCTGG CGGTGGTTCC CCTCATCCGG
GAGATGTCCC ACCTGCCGGT CATGGTGGAC CCTTCCCACG CCACGGGAAA GCGGAGCCTC
GTGGCCCCCA TGGCCAAGGC GGCACTGGTG GCCGGAGCCC ACGGCGTCCT GATTGAAGTC
CATCCGGAGC CGGACAAGGC CCTCTCCGAC GGTCCCCAAT CCCTGACCTT CCACGGCTTT
GATCTGCTCA TGGAGGAAAT CAGGCGCCTG AACGCATTCC TCGGGGTCGA CGACGGTGGA
GAAAAAGCCC CTTGA
|
|---|
| Protein sequence | MLIVMIHKAG PKQIEAVVKA VETMGLTAAP IPGSERTAIG VLGNKGYVDD TTIRDLPGVQ
EVIHVSKPYK LVSRDFHPRN TIVKVCGISI GEGKRPVVVA GPCAVEGEEQ ILKTARAVKK
AGADLLRGGA FKPRTGPHTF QGMREEGLKL LAKAREATGL PIVTEVMSPD TVGLVAEYAD
LLQVGARNMQ NFELLKELGR IQKPVLLKRG MSATIEEFLA AAEYILAEGN PHVILCERGI
RTFETATRNT LDLAVVPLIR EMSHLPVMVD PSHATGKRSL VAPMAKAALV AGAHGVLIEV
HPEPDKALSD GPQSLTFHGF DLLMEEIRRL NAFLGVDDGG EKAP
|
|---|
| |