| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0005 |
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| Symbol | |
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| ID | 3739907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 6570 |
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| End bp | 9143 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637777284 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_382980 |
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| Protein GI | 78221233 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000593628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.429362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAC AGACCCTGAA CAAGACTGCC GTCAATATCG AAGACGAGAT GAAACGCTCG
TACATGGACT ACGCCATGAG CGTCATCATC GGCCGGGCCC TCCCCGACGT GCGGGACGGC
CTGAAGCCGG TGCACCGGCG TTGCCTCTAC GCCATGTACG ACATGGGGAA CGATTACAAC
AAGCCCTACA AGAAGTCGGC CCGGGTGGTC GGTGACGTGA TCGGTAAGTA CCACCCCCAC
GGCGACACGG CGGCCTACGA CACCATCGTC CGGATGGCCC AGGACTTCTC CCTCCGCTAC
CCCTTGGTGG ATGGCCAGGG GAACTTCGGC TCCGTGGACG GCGACTCGCC TGCGGCCATG
CGGTACACCG AAATCCGGAT GGAGCAGCTG GCCCACGAGC TCCTGAACGA TCTGGAGAAG
GAGACTGTTG ACCTGGGGTT CAACTACGAC GGCTCCCTCA CGGAGCCGCT GGTGCTCCCC
TCCAAGTTCC CGAACCTCCT GGTGAACGGC TCTTCGGGGA TCGCCGTCGG CATGGCCACC
AACATCCCCC CCCATAACCT CTCGGAGGTC ATCGACGGGA TCATTGCCAC CATCGGGAAC
CCGCACATAA GCTTCGAGGA GCTCCTGGCC CTGGTCCCCG GTCCCGATTT CCCCACCGGC
GGGTTCATCT ACGGCCGGGA GGGGATCCTC CAGGGGTACC GGACCGGCCG CGGCATCGTC
CAGATGCGAG CCCGGGCCAG CATCGAAACC CACAAGAAGA CCGAGCGCCA GTCCATTGTC
GTCACCGAGA TTCCCTACCA GGTGAACAAG GCGAACCTCA TCACCAAGAT CGCCGAGCTG
GTGCGGGAGA AGAAGCTGGA GGGGATCAGC GACATCCGCG ACGAGTCCGA CCGGGACGGG
ATGCGGATCG TCATCGATCT CAAGAGGGAC GAGAATCCCC AGGTGATCCT CAACCACCTC
TACAAGCAGA CCCAGATGCA GACCTCCTTC GGCATCAACA TGCTCGCCAT CGTGGCGGGA
CGGCCGAAGG TCCTGACGCT TCAGGACGCC ATCGGCCACT TCATCGACCA TCGCCGCGAG
ATCGTCACCC GGCGCACCAT CTTCGATCTC AAGAAGGCCG AGGCCCGGGC CCACATATTG
GAAGGCTACA AGATTGCTCT CGACTGGCTC GACGCGGTCA TCGAGCTGAT CCGGGGGTCA
AAGACCCCGG CCGAGGCCCG GGAAGGGCTC ATGTCAGGCC TCTTTTCCGA CGAGGAGTGG
CTCCAGAAGA TGGGGCTCCC CCTGCCGGCC ATCCACAGCC AGTACCAGAA ACCGGTGCGC
CTCACCGAGG TCCAGGCCCA GGAGATCCTC AACCTGCGGC TCCACCGCCT CACGGGTCTG
GAGCGGGACA AGATCCTCCA GGAGTACGAG GACATCCTCA AGTACATCGC CCGTCTCAAG
GAGATCCTCG CCTCCGAGGC GGAGATCCTC AAGATCATCG TGGGAGAGCT GCGGGAACTG
AAGGAAAAGT TCGGCGACGA GCGCCGCACC GAGATCGTGG ACCGGAGCGC CGAGATCTCC
CTGGAGGACA CCATCGTCGA GGAGGACGTG GTGGTCACCG TCTCCCACAC CGGCTACATC
AAGCGGACCG CCGTCTCCCA GTACCGTTCC CAGCGCCGGG GGGGGAAGGG GAAGACCGGC
ATGAAGACCA AGGAGGAGGA TTTCGTCGAG CACCTCTTCG TCGCCTCCAG CAAGGACTTC
ATGCTCTTCT TCACCGACGC CGGCAAGGTC TACCAGATCA AGGTATACGA GATTCCCGAG
GGGGGGCGCG CCACCCGTGG CAAGGCCATC GTCAACCTCC TGAACCTCCA AGAGAACGAG
CAGATCACCG CCATCCTCTC GGTGAAGGGG TTCGACGACG AGCGAAACAT TCTCATGGCG
ACCCGCCTCG GGGTCGTGAA GAAAAGCCCC CTGCGGGAGT ACGCCAACAT CCGGAGCGGC
GGGATCATCG CCGTGAACCT GGACGAGGAG GACAAGCTCA TTGCCGTGGC CCTCACCGAC
GGGCGGCAGG ACGTACTCCT GGCATCCAGG AACGGCAAGT CGATCCGCTT CCACGAGGAG
GACGCCCGTC CCATGGGGCG CGTGTCGCGC GGGGTGCGGG GAATGACCCT GGAGGACGAC
GACGTGGTGA TCGGCATGGA AGTCATCAAC CCGAGCGCCA CCGGTTCAAC CATCTTCACT
GTCACCGAGA ACGGCTTCGG CAAGCGGACC GAGCTGGACG AGTATCGGGT CCAGTCCCGG
GGGGGCAAGG GGATCATCAC CATCAAGACC ACCGAGCGCA ACGGCTGCGT CGTGGACATC
ATGCAGGTGA CCGACGAGAA CGACCTCATG CTCATCACCG ACCAGGGGAA GATCCTCCGG
ATACCGGTGG CCCCCTTCTC GGTCATCGGC CGCAACACCC AGGGGGTCAG GCTCATGACC
GCCGAACAGA ACGAGCGGAT CGTGGCCGTA GCCAAGCTGG CCGAAAAGGA TGAGGGAGAT
GAGGGGCCCG ACAGCGGCGA TGACCTTCCC GAGGCGGAGG TTGTCGAGGA GTAG
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| Protein sequence | MLEQTLNKTA VNIEDEMKRS YMDYAMSVII GRALPDVRDG LKPVHRRCLY AMYDMGNDYN
KPYKKSARVV GDVIGKYHPH GDTAAYDTIV RMAQDFSLRY PLVDGQGNFG SVDGDSPAAM
RYTEIRMEQL AHELLNDLEK ETVDLGFNYD GSLTEPLVLP SKFPNLLVNG SSGIAVGMAT
NIPPHNLSEV IDGIIATIGN PHISFEELLA LVPGPDFPTG GFIYGREGIL QGYRTGRGIV
QMRARASIET HKKTERQSIV VTEIPYQVNK ANLITKIAEL VREKKLEGIS DIRDESDRDG
MRIVIDLKRD ENPQVILNHL YKQTQMQTSF GINMLAIVAG RPKVLTLQDA IGHFIDHRRE
IVTRRTIFDL KKAEARAHIL EGYKIALDWL DAVIELIRGS KTPAEAREGL MSGLFSDEEW
LQKMGLPLPA IHSQYQKPVR LTEVQAQEIL NLRLHRLTGL ERDKILQEYE DILKYIARLK
EILASEAEIL KIIVGELREL KEKFGDERRT EIVDRSAEIS LEDTIVEEDV VVTVSHTGYI
KRTAVSQYRS QRRGGKGKTG MKTKEEDFVE HLFVASSKDF MLFFTDAGKV YQIKVYEIPE
GGRATRGKAI VNLLNLQENE QITAILSVKG FDDERNILMA TRLGVVKKSP LREYANIRSG
GIIAVNLDEE DKLIAVALTD GRQDVLLASR NGKSIRFHEE DARPMGRVSR GVRGMTLEDD
DVVIGMEVIN PSATGSTIFT VTENGFGKRT ELDEYRVQSR GGKGIITIKT TERNGCVVDI
MQVTDENDLM LITDQGKILR IPVAPFSVIG RNTQGVRLMT AEQNERIVAV AKLAEKDEGD
EGPDSGDDLP EAEVVEE
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