| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0004 |
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| Symbol | |
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| ID | 3739906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 4149 |
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| End bp | 6536 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777283 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_382979 |
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| Protein GI | 78221232 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00743221 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.701582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG AACTGAACAA CGATTACGGA GCGGACAAGA TCAAGGTCCT TGAGGGGCTC
GAAGCTGTTC GCAAGCGCCC CGCCATGTAC ATCGGCTCAA CCGCGAGCCA GGGGCTCCAC
CATCTGGTCT ACGAGATTGT CGATAACTCC ATCGACGAGG CCCTGGCCGG CTACTGCAAC
GAGGTGAACG TCACCATCCA CCTGGACGGC TCCATTACGG TGGTGGACAA CGGCCGGGGT
ATTCCCACCG AGATGCATCC CACTGAAGGG AAACCGGCGG CGGAGGTGGC CCTTACGGTT
CTCCATGCCG GCGGTAAGTT CGATAATACG TCATACAAGG TGTCCGGCGG TCTCCACGGG
GTCGGCGTAT CGGTCGTTAA CGCCCTGTCG AAAAAGCTTG AACTGGGAAT TCGCCGTGAC
GGGAAGGTGT TTCAGCAGTC CTATGCCTAC GGAGCACCGC TGACTCCCCT GGAAATTGTG
GGGGAGACCA AGAAACGGGG AACCAGAATC ACTTTCCTCC CCGACGACAC CATCTTCGAG
ACCACGGAAT TTTCCTTCGA TATTCTTTCC CAGCGGCTGC GGGAGCTGGC CTTCCTGAAC
GCCGGGGTGC GGATCACCAT CTCCGACGAG CGGGAAGAGG GTAAACACCA CGACTTTCAC
TACGAGGGGG GAATCGTCTC CTTCGTGGAG TACCTGAACC GGAACCGAAC CGTGCTCCAT
CCGAAACCGG TCTACTTCCG GGGTGAGAGG GCGGGGATCG ACATGGAGAT CGCCATCCAG
TACAACGACT CCTACGACGA GAAGGTTTTC ACCTTTGCCA ACAACATCAA CACCCACGAG
GGTGGTACCC ACCTGGTGGG GTTCCGGGCG GCACTCACCC GCTCCATGAA CTCCTACGCC
GCGGCCAACG AGCTGACGAA GAAGGAGAAG GTCTCCATCT CCGGCGAGGA TCTGCGGGAG
GGGCTCACGG CGGTAATCTC AGTCAAGATT CCCCAGCCCC AGTTCGAGGG GCAGACCAAG
ACCAAGCTTG GGAACTCCGA GGTGAAGGGG TTCGTGGAAT CCCTCATGAA CGAGCAGCTG
GCGGTCTTCC TGGAGGAGAA CCCGAAGATC GCCAAGGACA TCATCGGCAA ATCCATCGAA
GCGGCCCGGG CCAGGGAAGC GGCCCGAAAG GCCCGGGAGC TGACCCGGCG TAAAAGTGCC
CTGGACATCT CCAGCCTCCC CGGCAAGCTG GCCGACTGCC AGGAGCGGGA CCCGGCCCTC
TGTGAGCTCT ATCTCGTCGA GGGTGACTCC GCCGGCGGCT CCGCCAAACA GGGACGGGAC
CGGAAGTTCC AGGCGATCCT GCCGCTCAAG GGGAAGATCC TCAACGTGGA GAAAGCCCGG
TTCGACAAGA TGCTCTCCTC CCAGGAGATA GGCACCCTGA TCACGGCCCT GGGTACCAGC
ATCGGCAAGG AAGACTTCGA CGTGGCGAAG CTCCGCTACC ACCGGATCAT CGTCATGACC
GACGCCGACG TGGACGGCTC CCACATCCTG ACGCTGCTTC TCACCTTCTT CTTCCGGCAG
ATGCCGGAGG TGGTGGAGCG GGGGCACCTC TACATCGCCC AGCCGCCGCT CTACAAGGTG
AAGCGGGGCC GCAAGGAGCT CTATCTCCGC AACGAGGCGG CCATGCAGGC TTACCTCCTG
GAGGAGGGGA CCGAGGATAT GGTCCTCTTC CTGGAGAATG GCGAGAAGAC CTACACCGGC
AAGCAGATCA TCCCGATTCT CAAGCAGCTG GTGGAGTACC GGACCATTCT GGACAAGGTG
GTGCGCAAGG GGATCAATGA GGAGCTCATC CGGGTCTTTC TGCGGCTCGG GGTCAAGGCC
GGCATCGAGG ACATGGAGCA GCTGGTGCCG TACCTGGCGA ACATCTCCCG GGTCTACGAG
GGGGGTGATT CCAGCCCCCT GGACGACGGG CGGGCCATCG TGCGGCTCGG CAACCTCCGG
ATTGCCCTGG ACCAGCACAC TCTCGACATC ATCGGATCCT ACGAGTACGG GCTCCTGGCC
GAAAGCTTCC GGAAGGTCAG GGAGATGTTC GGCGACGGCC GGGCCGTGGT CTCCAGCGAG
GGGAAGGAGC TCTTCGCCAC CGCCATCGGG CTCGACCTCC TCTCCTTCTT CATGGACTCC
GCCAAGAAGG GGCTCTCCAT CCAGCGCTAT AAAGGTCTCG GCGAGATGAA CCCGGACCAG
CTCTGGGAGA CGACCATGGA GCCCACCAAC CGGACGCTCC TCCAGGTGAA GATCGAGGAC
GCCATCGAGG CCGACACCAT CTTTACCATC CTCATGGGAG ACCAGGTGGA GCCCCGCCGG
GACTTCATCG AGAAGAACGC CCTGAACGTG TCGAACCTCG ACATCTGA
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| Protein sequence | MADELNNDYG ADKIKVLEGL EAVRKRPAMY IGSTASQGLH HLVYEIVDNS IDEALAGYCN
EVNVTIHLDG SITVVDNGRG IPTEMHPTEG KPAAEVALTV LHAGGKFDNT SYKVSGGLHG
VGVSVVNALS KKLELGIRRD GKVFQQSYAY GAPLTPLEIV GETKKRGTRI TFLPDDTIFE
TTEFSFDILS QRLRELAFLN AGVRITISDE REEGKHHDFH YEGGIVSFVE YLNRNRTVLH
PKPVYFRGER AGIDMEIAIQ YNDSYDEKVF TFANNINTHE GGTHLVGFRA ALTRSMNSYA
AANELTKKEK VSISGEDLRE GLTAVISVKI PQPQFEGQTK TKLGNSEVKG FVESLMNEQL
AVFLEENPKI AKDIIGKSIE AARAREAARK ARELTRRKSA LDISSLPGKL ADCQERDPAL
CELYLVEGDS AGGSAKQGRD RKFQAILPLK GKILNVEKAR FDKMLSSQEI GTLITALGTS
IGKEDFDVAK LRYHRIIVMT DADVDGSHIL TLLLTFFFRQ MPEVVERGHL YIAQPPLYKV
KRGRKELYLR NEAAMQAYLL EEGTEDMVLF LENGEKTYTG KQIIPILKQL VEYRTILDKV
VRKGINEELI RVFLRLGVKA GIEDMEQLVP YLANISRVYE GGDSSPLDDG RAIVRLGNLR
IALDQHTLDI IGSYEYGLLA ESFRKVREMF GDGRAVVSSE GKELFATAIG LDLLSFFMDS
AKKGLSIQRY KGLGEMNPDQ LWETTMEPTN RTLLQVKIED AIEADTIFTI LMGDQVEPRR
DFIEKNALNV SNLDI
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