| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3614 |
|---|
| Symbol | |
|---|
| ID | 6367069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3884063 |
|---|
| End bp | 3884995 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642679030 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001953835 |
|---|
| Protein GI | 189426658 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA GTGTACTGAT CATTGACGAT TCTGAAGCTG TCCGGGAAAA GATCATCAAG
ACCCTGGAGT CCCGTGATCT TTTTTCCCGT TTCTATCAGG CCGAAGACGG CCTGGAGGGG
TTCAAAAAGC TGCTGGCTTC GCCGGTGGAT ATCATCCTCT GCGACCTTGA AATGCCTCGC
ATGGACGGCT TCAAGTTCCT GGGGATGCTG AAGGGACGAC CGGAAGTATC CGATACCCCG
GTCATCATCC TGACCGGCAA CGATGACCGC GAGTTGAAGA TCAAGGGGCT TGAGCAGGGG
GCCTGCGACT TCATCACCAA GCCGTTTGAT CCGGAGGAAC TGGTGGCCCG GATGCGGGTG
CATCTCAAGA TCAAGCATCT GCAGGACGAC CTGAAACGAT CCAATGAACT GCTGCTGGAG
CTGTCCAACA CCGACCACCT GACCGGCCTG TTCAACCGCC GTTTCCTGAT GGAGGCGCTG
GATAAAGAGG TGCAACGGGC ACGGCGCAAG GATGGCCAGG TAGCACTGCT GTTGATGGAT
ATCGACCACT TCAAACGGGT CAACGACACC CACGGCCATC TACAGGGTGA CGTGGTGCTG
CAGAAGGTGG CGCTGCATAT CCAGAAAGAG CTGCGCAGCT ATGATATTGC AGCCCGCTAT
GGCGGCGAGG AGTTTGTTGC CGTACTGCCG GATACCTCGT TGAAAGAGGC CTTTAATGTG
GCAGACCGGA TCCGCCTTTC CGTGCAGGGG ATGCATTTTG CCGGTTCTCT TGCCAATGAG
CGGGTCACGG TCAGCCTGGG GGTTGCCCTC TTTCCTTCAC CCTGCTTTGA TGATATTGAC
GGTCTGCTGC GGGCCGCCGA CGAGGCGCTC TACCAGGCCA AGGAGCGGGG CCGTAACCGG
GTCATCATCA GTGATCCCGG CTGCTCACAG TAA
|
|---|
| Protein sequence | MADSVLIIDD SEAVREKIIK TLESRDLFSR FYQAEDGLEG FKKLLASPVD IILCDLEMPR
MDGFKFLGML KGRPEVSDTP VIILTGNDDR ELKIKGLEQG ACDFITKPFD PEELVARMRV
HLKIKHLQDD LKRSNELLLE LSNTDHLTGL FNRRFLMEAL DKEVQRARRK DGQVALLLMD
IDHFKRVNDT HGHLQGDVVL QKVALHIQKE LRSYDIAARY GGEEFVAVLP DTSLKEAFNV
ADRIRLSVQG MHFAGSLANE RVTVSLGVAL FPSPCFDDID GLLRAADEAL YQAKERGRNR
VIISDPGCSQ
|
|---|
| |