Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3608 |
Symbol | |
ID | 6367517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3878454 |
End bp | 3879746 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642679024 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001953829 |
Protein GI | 189426652 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCTG AATCCTGCTC ACTCTATCAA ACCCTGGTGG AGAACAGTCC GGATGTGATC TGGCGGACTG ATCACGAGCT GCGTTTCAGC TACCTGAATC CTGCGGTCAC AGAGCAGTTC GGCTACAACC CGGAAGAACT GCTGGGGCGC ACGCTGACGG AGCTGCTTGC CCCCGCCTCC CGAGATTTTG TTCTGGCCCG CCTGGCCGCC AGGATGGCCG ATGAGCTGAG CGGCAAGAAG CTTGGCCAGC GTCTGCTCGA GATCCAGATT ATCAGTAAGG CCGGCCGGCT GATTCCGTCT GAGGTGACCG TTGCTGCCAT CCGTAATGAT GCCGGTGACC TGGTCGGTTT TCAGGGGGTA ACCCGCAACA TTGCTGACAG GGTGCGGATT GAAGAGCGGA TGCGGCTTTC CGAACGCAAC TACCGTGAAC TGGTGGAGCG TTCCAGCAGT TTCATCCTGC GTTGGACCAG CGATGGGATC ATTACCTTTG CTAATTCCCA TACCTGCGAA TTTTTCGGAT TTTTGCCGGA AGAGCTGGTC GGCCGTCACC TGGTGGGGAC GATAGTACCG GAGATCGAGA GTACCGGTCA GAGTCTGCGG CAGCTAATTG CGGAAATAGG GGCGAATCCT GAACAGTTTC GTACCTCTGA ACATGAAACT ATCTGCTGGG ACGGCAGCCG GATCTGGGTG GCCTGGAATA ATTCGCCTGC CTATGATGAA AAGGGGCGGC TGGAAATCCT GAGTGTCGGC CATGATGTCT CGGAACGGCG TCAGCGAGAG AAACAGCTGG CCTATCTGAC GGTCCATGAC CCGATGACCG GCCTCTATAA CCGGGCCTAC TTTGACACCG AGTTTGAGCG TCTTTCCCGT GGTCGGCGTT TCCCGGTCAG CGTGGTGATC GCCTCTCTTG ATAATCTTCA GCTGACCAAT GACGAACAGG GGCGCGAGCA GGGGGATCTG ATCCTGATGA AGGCGGCCCG CCTGCTGAAA GAGGGGTTCC GGGCCGAAGA CCTGGTCTCC CGTACCGGTG GCGATGGCTT TGCAATTCTA CTGCCGGGGC TTGATGAACA GCAGACGGCA ACCGGCCTGA TTCGCTTCAG GGCGGCAGTG GCACGTGCCT CAGAACATGC TCCGGCAGTC TTTTTCTGTA TGGGGGCCAG TACGGCCCAT ACCGGCAGTG AGCTGTTGCG GGCGCAACGC GAGGCCTCGG CTGCCATGGC TGCCGAAAAG GTATTGAGAA AAAAACAACG CGAACAGCAG GAAAAAGAGC AGGAGGAGGG GACACCGGAA TGA
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Protein sequence | MRSESCSLYQ TLVENSPDVI WRTDHELRFS YLNPAVTEQF GYNPEELLGR TLTELLAPAS RDFVLARLAA RMADELSGKK LGQRLLEIQI ISKAGRLIPS EVTVAAIRND AGDLVGFQGV TRNIADRVRI EERMRLSERN YRELVERSSS FILRWTSDGI ITFANSHTCE FFGFLPEELV GRHLVGTIVP EIESTGQSLR QLIAEIGANP EQFRTSEHET ICWDGSRIWV AWNNSPAYDE KGRLEILSVG HDVSERRQRE KQLAYLTVHD PMTGLYNRAY FDTEFERLSR GRRFPVSVVI ASLDNLQLTN DEQGREQGDL ILMKAARLLK EGFRAEDLVS RTGGDGFAIL LPGLDEQQTA TGLIRFRAAV ARASEHAPAV FFCMGASTAH TGSELLRAQR EASAAMAAEK VLRKKQREQQ EKEQEEGTPE
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