Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3544 |
Symbol | |
ID | 6369391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3813871 |
End bp | 3814626 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642678959 |
Product | two component transcriptional regulator, LytTR family |
Protein accession | YP_001953765 |
Protein GI | 189426588 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0394969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCA CGGTCTTTCT GATCGACGAC GAGGCCCCTG CCCGGCGGGA ACTGCGCTAC CTGCTGGAGC AGCTGCCGGA ACTTGAGATT GTCGGCGAGG CCGCCACCGC AACGGAAGGG CTGCGTCTGC TGCGCCAGCT GAAGCCCCGG TTGCTGTTTC TGGATATCCA GATGCCGGGA CTGACCGGGA TTGAACTGTC CCAGATCCTC CAGGAACTGC CGGAACGCCC GCTGGTGGTC TTTTCCACCG CCTACAGCCA GTTTGCGGTG GATGCCTTCA ATCTTGAGGC GTTTGATTAT CTGCTCAAGC CGGTCACCCT GGAGCGGCTT GGCAAGACCA TCGACAAGGT ACGCAAGCAG CTGGCTGCAA CGCCGCCCGG CCCTGAAAGA CCCCTGCCTG AACCGCCCCA TGACGACCGC AAGTGGGTAG CGGCCCGCCA GGGCAGCAAG ATCCTGCCGA TAGCACCGGA GAGTATTGTT TTTGTCCGCT GTACCGAAGC GGTCACCCAT ATCCATACCG CCACGCGGAT CTACCAGACC AGCCACACCA TTACCGCCCT GCAGGAACAG CTTGAGCCGT ACGCCTTCTT CCGTGCCCAT CGCAATTCAC TGGTCAACCT CAACTGTATA CTGGAGATCA TCCCCTGGTT CAGCGGCAGC TGCAAACTGG TGATGAACGA CCCGGCCCGG ACCGAGATCC TGGTCAGTCG CTACCATGCC AGGGATCTCA AGAAACACCT GATCTCCCAG GTCTGA
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Protein sequence | MNITVFLIDD EAPARRELRY LLEQLPELEI VGEAATATEG LRLLRQLKPR LLFLDIQMPG LTGIELSQIL QELPERPLVV FSTAYSQFAV DAFNLEAFDY LLKPVTLERL GKTIDKVRKQ LAATPPGPER PLPEPPHDDR KWVAARQGSK ILPIAPESIV FVRCTEAVTH IHTATRIYQT SHTITALQEQ LEPYAFFRAH RNSLVNLNCI LEIIPWFSGS CKLVMNDPAR TEILVSRYHA RDLKKHLISQ V
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