| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3468 |
|---|
| Symbol | |
|---|
| ID | 6368887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3729213 |
|---|
| End bp | 3730559 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642678885 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001953691 |
|---|
| Protein GI | 189426514 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000163735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTAA AGCAGATCAT CATATCGGGA CTGATTTTGC TGCTGTCCGG GACTGGCGCT
CAGGCTGCGG AGATGCAGCG TGTAACGCTG CATGAAGCGA TAGCAAAGGG CTTGGAGCGG
AATAATGAGG CCCGGTCAGC TCGATTTCAG GCAGAGTCGG TCCGGTCCGG AGCAACGGCC
GCTTCATTAC ACTATCTGCC GAGCGTGACG GTAGAAGAAG CCTGGTCGCG CTCAGATCTG
CCGGTCAGTA CCTTTATGAT GAAACTGAAT CAGGGACGTT TCACCAATCA GGACTTTGAT
GCTGCAAAGT TGAATAACCC TGCACCGGTG AGTGACTTCC GGACCGTTGT GTCGGTGGAA
CAACCGATTC TGGTGCCTGC AGCCTGGGCT GCGCACAAGG CGGCCCAGCG AGGGGCAGAA
CGACAGGAGG CAATTTCAGA ACAGGCACGG CAGCAGATTG CTTTTCAGAT ATTCCAGCAT
TATCTGGAGG TGCAGAAGGC TCATGCCCAG CTGCAGGCAT CAGCAAAGGC CCTGGATGAG
GCGCGGGAGA GCAGGCGTCA GGCAACGGTC AGGACTGCAG CGGGCCTTGG GCTCAAGTCG
GATGAACTGC GGGCGGCAAC ACAGTTGGCA GCCATGGAGC AGTACCACAT CAGTGCAGCA
AACAACCTGA CCCTGGCCCG GATGCGGCTG GCCCTGGCAA CGGGTGGACA GCCTGGTGAT
GAACTGGATG TTGCAGAGCC GGTACAACTG AAACGGTCTG AGCAGGAGTT GAGCGGGCTG
ATCAGCACAG CACAACGGGA AAGGCGTGAC CTGCAGGCTT CAGAGCGGGG GAAGGAACAG
GCAGATGCTG CCTTGCTGCA GGCACGTTCC GGATTTCTGC CAACGGTGGG GGCCGTTGGA
GCATGGCAGA TGAATGATGC GAACAGCGCG TTTGCGAGAG ACCATGATGC CTGGATGGTC
GGGGTTTCCC TGCGCTGGAA TATCTTCGAT GGTTTTCGTA CCTGGCATGG CAGCGGACAG
GCCCGGGCTT CCCGAGCAGC GGCTGTTGAA CAGCTGGAAC AGGTCAGAAA AGAGGTCAGC
TATCAGGTCC ATGAGGCGTG GCTGCGCAGG ATCGAAGCAG AAAAGCGTCG AGAAGTGGCC
AGCGCTGCTG TTGCGGCTGC TGATGAAGCA GCCCGGCTGC TGGCAAAGCG TTTTGATAAT
GCACTGGCAA CCATGGTTGA GCTTCTGGAT GCCCAGAGTG CCTTGAACCA GGCCAGAGCC
AACCTGGTGG AAAGCGATGC CAACCTGATG CTTGCCACCG GCCGTCTATA CCACTCCGCT
GGTATCTTTC TGAAGGAGGT TCAGTAA
|
|---|
| Protein sequence | MRVKQIIISG LILLLSGTGA QAAEMQRVTL HEAIAKGLER NNEARSARFQ AESVRSGATA
ASLHYLPSVT VEEAWSRSDL PVSTFMMKLN QGRFTNQDFD AAKLNNPAPV SDFRTVVSVE
QPILVPAAWA AHKAAQRGAE RQEAISEQAR QQIAFQIFQH YLEVQKAHAQ LQASAKALDE
ARESRRQATV RTAAGLGLKS DELRAATQLA AMEQYHISAA NNLTLARMRL ALATGGQPGD
ELDVAEPVQL KRSEQELSGL ISTAQRERRD LQASERGKEQ ADAALLQARS GFLPTVGAVG
AWQMNDANSA FARDHDAWMV GVSLRWNIFD GFRTWHGSGQ ARASRAAAVE QLEQVRKEVS
YQVHEAWLRR IEAEKRREVA SAAVAAADEA ARLLAKRFDN ALATMVELLD AQSALNQARA
NLVESDANLM LATGRLYHSA GIFLKEVQ
|
|---|
| |