| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3442 |
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| Symbol | |
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| ID | 6367485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3700829 |
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| End bp | 3702769 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642678860 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001953666 |
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| Protein GI | 189426489 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0622548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGC CGGACAGGCT GTATAAACGT ATCTGTTGGG GAGTTTGCCT CCTGTCGCTG
GCCTTTTGGA GTTGTGGCGC GGCCTATTTG CGCCATGAGC GGGATACGCA GGAAAAATTG
CAACTTGCGG GTCAGACACA TGCTCAGGAA GTTGCGTGGC AGGCCGTTAC TACTGCCCAT
CGCATTGCCA TGCAGGCCTA TTTTGACAGC TACATTATGC AGCCTGAGGT GCTGGATATT
CTGCAGGCGG CCACGACAGG TGATCGTAAT CAACAGGCTA TTGAGCGGGT CAGGCTGTAC
CGTAAACTGT CCCCGGTCTA CGAGCAATTT CGCCAACGTG ATGTGCGGCA GCTACACTTT
CATACGCCTG ATAACCGCTC GTTCCTCCGT TTTCATTCTC CCCATAATTC TGGTGACTCG
TTGGTGGCCA GCCGTCCTTC TGTCGTGGAG GCGAACCGGA CACGCAAACC GGTTTTTGGC
TTTGAAACCG GGCGGGTTAT CATAGGATTC CGCAATGTCT TTCCGATTGT CTGGCAGGGT
CAGCATCTGG GCAGCGTTGA ACTGTCCCAG CCGTTCGAGG CAGTGCGCAA AGGGCTGCAT
GATCTTGATG CCGCCAAGGA TTACCTGCTG CTCTTGAAGT CATCGGTGCT GTTACCAAAG
CTATTTGATG AGCATAAGAA AAATTACGCT CCGTCACTCA TCAGCCAGGA CTGGCTGGTC
GAAGACCCCC AAAGAGAGCT GCCAGACTCC CCCCCTCCTC TTTCTCCGGT ATCCCAGGAG
GTATATAAAC TACTCAAGAC AGACCAGGGC TTTCAGGCCG CCCTGGCAGC AGGAAAACCT
GCATCAGTTG CCATCAGCCA TGTTGGACAG GTCTTTCAGG TCAGCCTGGT CCCGTTGCAT
GATACTGATG GTGCTGCCAG CGCTGTGATG CTTACGTTCG TCCGGACACC GGAACTTGAA
AGCCTTTATG CCAGTCATCG TACTAATCTG CTTGTCTTCA CGATCATGAC ACTGTTCGGC
GGAACGGCAC TTTACCTTTT TTTGAGTAGT ATGCAGACTG TGCTGGAGCA GGAACAGCGC
CTGGCACTGA TTACGTCAAA TATTGCCGAT GGTATTTATG TCATGGACGG TCAGGGCAGG
ATCACTTTTG TCAATGAACG TGCGACCGAA ATACTGGGGT TTGCCCCTGA TGAGTTGAAC
GGTCAAATAG CCCACGATCT GTTTCATCGC CATGCTGGCG GAAATCAGAC GGTGCTAGAA
GAGTGCCCTA TTTATCGTGT AATCCAGACC AGAGGGCGCT ATGAAGGAGA AGAGCAGTTT
ATTCAAAAAA ACGGTGATTT GCTAATGGTG GAAGTCGCCA GCCAGCCCAT GCTCAAGAGT
GGACGGATTA TCGGTTCAGT TACGGTTTTC CGCGATATCA CTGAGCGTAA GCAGCTGGAG
GAACAGTTGC GGCTTTTGTC GATTACCGAC CCGTTGACCG GTGTGTATAA CCGGCGTTTT
CTGCAAGAAA CCTTGTTAAA AGAGCTGTGC AGGGCCGAGC GGCATGGAGA GCCATTCAGT
CTGATCATGC TGGATATTGA TCACTTTAAG CAGGTTAATG ACCGCTACGG GCATGATGTG
GGTGACCAGG TGTTACGGCA TCTGGTAAAG CTGATTCAGA AGCGGATCCG TAGTTCAGAT
TGTCTGGCCC GTTGGGGGGG GGAAGAGTTC ATTGTTCTTT TGCCCCACAC CGGCTTGTTA
GCTGCCGCAG CCCTTGCAGA AACTCTATTG GAAGACCTGC GTGTTTCTGA ATTAAAGGGA
GTCGGTTGTG TGACGGCTAG TTTCGGGGTG GCTGTTTCCA GGCCTGGTGA TACAGTCGAG
CAGCTGGGAC AGCGGGCTGA TGCTTTAATG TATTTGGCTA AACAGGCCGG GAGGAACTGT
GTTCGTGCTG AGAGTGTATA A
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| Protein sequence | MKLPDRLYKR ICWGVCLLSL AFWSCGAAYL RHERDTQEKL QLAGQTHAQE VAWQAVTTAH
RIAMQAYFDS YIMQPEVLDI LQAATTGDRN QQAIERVRLY RKLSPVYEQF RQRDVRQLHF
HTPDNRSFLR FHSPHNSGDS LVASRPSVVE ANRTRKPVFG FETGRVIIGF RNVFPIVWQG
QHLGSVELSQ PFEAVRKGLH DLDAAKDYLL LLKSSVLLPK LFDEHKKNYA PSLISQDWLV
EDPQRELPDS PPPLSPVSQE VYKLLKTDQG FQAALAAGKP ASVAISHVGQ VFQVSLVPLH
DTDGAASAVM LTFVRTPELE SLYASHRTNL LVFTIMTLFG GTALYLFLSS MQTVLEQEQR
LALITSNIAD GIYVMDGQGR ITFVNERATE ILGFAPDELN GQIAHDLFHR HAGGNQTVLE
ECPIYRVIQT RGRYEGEEQF IQKNGDLLMV EVASQPMLKS GRIIGSVTVF RDITERKQLE
EQLRLLSITD PLTGVYNRRF LQETLLKELC RAERHGEPFS LIMLDIDHFK QVNDRYGHDV
GDQVLRHLVK LIQKRIRSSD CLARWGGEEF IVLLPHTGLL AAAALAETLL EDLRVSELKG
VGCVTASFGV AVSRPGDTVE QLGQRADALM YLAKQAGRNC VRAESV
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