| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3415 |
|---|
| Symbol | |
|---|
| ID | 6368730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3668921 |
|---|
| End bp | 3670702 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642678834 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001953640 |
|---|
| Protein GI | 189426463 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
|---|
| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCTG ACAGAGAAGA AATAGCAGCG GTGTATTCGG GTGGCGAGCA AGGCGGCAAG
GAAGAGGCGA CGCAGGCGTA CACAGCAGTA CGTCGAGGAG CCTCTGACGA AACCAACGCA
GCTCCCCGTT CGAATTCGCC GCTGCGGATA GTTGCATTAG GAGGCCTTGG TGAAATCGGC
ATCAACTGCA TGGCCTATGA ATATGGCGAT GATCTGATTC TGGTGGATGC CGGCCTGATG
TTCCCTGATG CTGACATGCC CGGTGTGGAC TATGTCATCC CTGATTTCAG CTGGCTGCGG
GAGCGGGCTG ACAAACTGCG CGGCATCCTG CTGACCCACG GCCACGAAGA CCATATCGGC
GCCCTGCCAT TCCTGCTGCG TGAATTTCCG GCCCCGATCT ACGGCACCGC CCTGACCCTG
GGAATTCTGG AAGGCAAACT GCTGGAATAC AAGGTCGAGG CGGATCTGAA CCCGGTTAAG
CCCCGGGACA CCGTCACTCT GGGCAGTTTT CAGGTTGAAT TCATCCGGGT CGCCCACTCG
GTGGTGGATG GCTGTGCCCT GGCGATCCGC TCACCGGAAG GAGTGGTGAT CCATACCGGC
GATTTCAAGC TGGATCAGAC CCCGGTGGAT GGCGAGGTGA CCGACCTGGC CACCTTTGCC
CGCTACGGCG ACCAGGGCGT CCTGGCGCTG CTGTCCGACT CCACCAACGT GGAGCGGGAG
GGTTACACCA TCTCGGAACG TTATGTTGGC GAGGCCCTCT CCGATCTGTT CCCCAAATGC
AAGGGCAGGA TCATTGTAGC TGCCTTTTCC AGTAATATCC ACAGGGTACA GCAGGTGGCC
GATGTGGCTG CCGCCTCTGG CCGCAAGGTG TTGCTGAATG GCCGTTCCAT GATCGCCAAC
GTCAGGATCG CCCGCCAGCT GGGTTACCTG AAGATCAGTG ACGACCTGTT GATGGACATT
CGCGAACTGC CCCACATCCC CCGTGAACAG GTCTGCATGA TCACCACCGG CAGTCAGGGA
GAACCGCTCT CAGCCCTTTC CCGGATCGCC ATGGATGATC ACAAACAGAT CAAACTGGAA
AAGGGTGACA CCGTCATCCT CTCCTCCCGC TATATCCCCG GCAACGAGCG GACCATTTCG
GAACTGATCA ACCACCTCTA CCGCCGTGGC GCCGATGTCC ACCATGAAAA GGTCTCCGAG
GTGCATGTCT CCGGCCACGC CTCCCAGGAA GAGCTGAAAC TGATGATGAA CATCACCCGG
CCCCGCTTTT TCCTGCCGAT TCACGGCGAA TACCGCCACC TGGTACTGCA CCGCCGATTG
GCCATGAAGG TAGGGATACC GGAAGAGCGC TGCCTGCTGG CGATCAACGG AGAGGTGGTC
AACTTTTACA ATGAAACCGC CTGTATTGAA GAAACCGTGG AGACCGGTCG GGTCTTTGTG
GATGGCAAAG GGGTCGGTGA TGTGGGAGAG GTGGTGCTGA AGGACCGACG CCACCTCTCT
GAAGACGGCA TGGTACTGGT GATCCTGGGG GTCAACCAGC ACACCGGCGA GTTCATCTAC
GGCCCGGAGA TCGTCTCACG GGGCTTTGTG TTTGAGGATG AAAGCCAGGC CTACCTGCAG
ACCGCCAGGG AGATGGTCCG GGAGGCCCTG AAAGAGTTGA GCGTTGAATT TCTGGCTGAC
CGGGATGAGG TGCGCCAGAT CGTACGTCAG ACCCTGAAGC GGTTCTTCAA GAAGAGTATC
GAGCGTCGAC CGATGGTGCT GCCGGTGATA TTGGAGATGT AA
|
|---|
| Protein sequence | MNADREEIAA VYSGGEQGGK EEATQAYTAV RRGASDETNA APRSNSPLRI VALGGLGEIG
INCMAYEYGD DLILVDAGLM FPDADMPGVD YVIPDFSWLR ERADKLRGIL LTHGHEDHIG
ALPFLLREFP APIYGTALTL GILEGKLLEY KVEADLNPVK PRDTVTLGSF QVEFIRVAHS
VVDGCALAIR SPEGVVIHTG DFKLDQTPVD GEVTDLATFA RYGDQGVLAL LSDSTNVERE
GYTISERYVG EALSDLFPKC KGRIIVAAFS SNIHRVQQVA DVAAASGRKV LLNGRSMIAN
VRIARQLGYL KISDDLLMDI RELPHIPREQ VCMITTGSQG EPLSALSRIA MDDHKQIKLE
KGDTVILSSR YIPGNERTIS ELINHLYRRG ADVHHEKVSE VHVSGHASQE ELKLMMNITR
PRFFLPIHGE YRHLVLHRRL AMKVGIPEER CLLAINGEVV NFYNETACIE ETVETGRVFV
DGKGVGDVGE VVLKDRRHLS EDGMVLVILG VNQHTGEFIY GPEIVSRGFV FEDESQAYLQ
TAREMVREAL KELSVEFLAD RDEVRQIVRQ TLKRFFKKSI ERRPMVLPVI LEM
|
|---|
| |