Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3369 |
Symbol | |
ID | 6369076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3616102 |
End bp | 3618105 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642678789 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_001953595 |
Protein GI | 189426418 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0774784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCAGA TGCAACCGGA TATACTGTGT TCGCTTGATC AAGCAGAGAC CCTGAACCGT CAGGGATTCC ATGAAGAAGC AGCGCTGATC TGCCGCAGAA TCCTGCAGCT GGACAGTGGT AACCTTGAGG CTACCTTCAT GCTGGCAACG ATCATGTATG CCACAGGCTC CTGGGATGAG GCAGCCATAT TGTACCGGCA GGCCTGTAAT CTGGCTCTTG AGATTGGCTT TTTACGGATA AACCTGGCAC TGGCTCTGCA GGAACTGGGG TGCTTTGAAG AGGCGTTGGC CGCTTTTGAC GAAGCTGAGG CACTTGGTGA AACAACCGTA AACCTTTATT ACAACCGAGG GGTCCTGTTG CAGCGGCTCG AGCGCATGGA GCCGGCCAGG CATGCGTTTG AGCAGGCGCT TGCGATTGAT CCGCAGCATC TCAATTCGTG GATCAACCTG ACAGCCGTCT GTCTGGCAAG CGATGACAAT GATGGAGCGC TCCACTCCTG CCGCCATGGT CTTCACCTTG ATTCAGACAA TGTTGCCTTG ATCGGGAATC TGGCAATAGT GTACGGGAAG ATGTTCCGGT TCGAGGAGTC TCTGGCCTGC TATCAGCGGG TGCTGGAGCT TGTAAGGCCG GATGAACGGG CCGAACTGCT TGGCAGCACT GCCAATTGCC TGAGTGAGCT CTGGATGGTT GATGATGCGA TTGCCTGCTT TGACCTGGCC ATTGCGAGTT CAAACCATCT CTTCCAGAAG CGTGCCTTGG CCAGCACACG TCTGTTTATG TTGCATTATT CAGCCAACTG GTCGGCAGCA GCCATAGCTG CAGAGCATAA AAACTGGGGC CAACAGTATT TTGAGCCTGT GGCAATGAAA CATTTTGCCA ACGATCCTGA TCCTGACCGC CCGATCAGGG TTGCCTACCT CTCTCCCGAC CTGAAGATTC ATGCCGTCGT ATTCTTTCTC CAGCCGGTTC TGGCTGCTCA CGATCCAGCT CAGGTAACAG TCTATTGCTA CTCGGATGTT AAAAAGCCCG ATGTTGTGAC ACGCCAGCTG AAAGAACAGC ACCACGTGAT CTGGCGTGAT TGTTCGGCAA TGGATGATGC GTCGGTGCAG GAACTGCTTC TGCAGGATCA GATTGACGTA CTGGTGGATC TGGCAGGGCA TACCGCCCTG AACCGCCTGC CGTTGTTTGC CGGGCGGGCG GCACCGCTGC AGGTCAGCTG GATCGGCTAT CCAAACAGTA CCGGTCTGAT GGAGATGGAT TACCGGATCA GTGATGCCTG GGCCGACCCT CCGGGCGTGA CCGATCCGTT TCACACCGAA GAGCTGATCC GTCTGCCGGA CAGCTTTCTC TGCTATCGTC CCGGAGCTGA TTTTCCGGCT GTGGGATCAT TGCCTTGTCA GACAAACGGG TATGTCACCT TTGGCTCTTT CAGTAACTTC AAGAAAGTGA CGCCTGACAT CCTTGACCTT TGGGCACGGA TACTTGCCAA AGTTCCTGAT TCCCACCTTG TTTTCAGGGC CAGGGGGCTT TCCCACGATC GTTTTGTGCG TGATATTGCC CCGCTCTTCC TGCGGCATCA GGTTGCTCCG GAGCGGATTT CTGTATTGGG GCATGCCCGG TCCGTGGTGG AAAACCTTGA GGGGTACCAT ACCATTGATA TTGCATTGGA TACCTTTCCC TATCATGGTA CCACCACTAC CTGTGAAGCG CTCTGTATGG GGGTGCCGGT GGTGACCAGG GCTGGCGACA GCCATGTTTC GCGGGTCGGC GTCAGTCTGC TGCACAGCGT TGGACTGCCT GAACTGATTG GTAATTCGCC GGAAGAGTAT TGTTCTCTTG CCGTTGCCCT TGCCGCTGAC ACCGTCCGTT TGGCAGCGCT AAGGAGCTCT TTGCGGGACC GGCTGCTGGC TTCGCCCCTT GCTGATAATA GTACCTTCAC CTGCCATCTG GAGGGAGTCT ACCGTCAGAT CTGGCAACGC TGGTGCAAGG AGAACAGCCG GTGA
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Protein sequence | MEQMQPDILC SLDQAETLNR QGFHEEAALI CRRILQLDSG NLEATFMLAT IMYATGSWDE AAILYRQACN LALEIGFLRI NLALALQELG CFEEALAAFD EAEALGETTV NLYYNRGVLL QRLERMEPAR HAFEQALAID PQHLNSWINL TAVCLASDDN DGALHSCRHG LHLDSDNVAL IGNLAIVYGK MFRFEESLAC YQRVLELVRP DERAELLGST ANCLSELWMV DDAIACFDLA IASSNHLFQK RALASTRLFM LHYSANWSAA AIAAEHKNWG QQYFEPVAMK HFANDPDPDR PIRVAYLSPD LKIHAVVFFL QPVLAAHDPA QVTVYCYSDV KKPDVVTRQL KEQHHVIWRD CSAMDDASVQ ELLLQDQIDV LVDLAGHTAL NRLPLFAGRA APLQVSWIGY PNSTGLMEMD YRISDAWADP PGVTDPFHTE ELIRLPDSFL CYRPGADFPA VGSLPCQTNG YVTFGSFSNF KKVTPDILDL WARILAKVPD SHLVFRARGL SHDRFVRDIA PLFLRHQVAP ERISVLGHAR SVVENLEGYH TIDIALDTFP YHGTTTTCEA LCMGVPVVTR AGDSHVSRVG VSLLHSVGLP ELIGNSPEEY CSLAVALAAD TVRLAALRSS LRDRLLASPL ADNSTFTCHL EGVYRQIWQR WCKENSR
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