| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3354 |
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| Symbol | |
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| ID | 6365984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 3590771 |
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| End bp | 3594409 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642678774 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001953580 |
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| Protein GI | 189426403 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCC ACCAGCGTCC TAAAGGTTCA GTCGCTGTCT GGTATCGTCT CGGCACCCGG
CAACTCCGGC AGAATCGCCC GGATGACGCG GCTGCGAGCT TTCGTCAGGC GCTGGCACAG
GATCCGATGC TGGCGGCAGC CTGGCACAAC CTGGCCCACG CCTGTCAGCA GATGCGCCAG
TATGATCACG CCCTGGTCAG CTACCGCCGG GCCTTGCAGT ACTGTCCCAA TGATGCCTGC
AGTCTCAACA ACCTGGGCGT ACTGCTCCGG GAGCTGGGAC GCCTGGATGA ATCACTGCAG
GTTCTGGGAC AGCTTGTCAG CCTCTACCCT GATGACGGCG ACGGCCACTG GAACCTGGCG
CTCTCCCTGT TGATGACCCG ACGCTACCCT GAAGGCTGGC AGGAGTATGA ATGGCGCTTC
CGCCGGACTC TCCCGGTCCG GGTCCATGAT CCCGGCAGCC CCCGCTGGCA GGGTGAAGCG
TTGGAGGGGA AAACCATCCT GCTCTGCTGT GAACAGGCCT ATGGCGACAG CATTCAATTT
GTACGCTTTG CCGCCGGCCT TGCCGATTGG GGCGCCACGG TGCTGCTGCA CTGTCCGGAC
CAGTCCCTGG CGCAGCTTCT TGCCGGTGCG CCGGGGGTCA GCCGGACCAT GACCCCGGAT
GAACCGTTGC CGCCGCATGA CTGCTGGTCT CCTCTGCTCA GCCTGCCGCT TTATCTGCAG
ACCAGTCAGG AAAGTATTCC GGCCTGCCCC TACCTGTTTG CCGGGAAAAC CGCCAGCCAA
CCGGTACTAT CCGGCACCGG CCTCAAGGTC GGTCTGGTCT GGTCCGGCCG CAGCACAGAC
CCGCAGCGGG CCTGCCCCGT GCAACTGCTG GCACCATTGG CGCGCTTTTC AAGGCAGGTC
ACGTTTTTTT CGCTCCAGCT GAACAGCACC CGCCATGACC TTGATCTGTT GCAGCACCTC
TTGGGAATCA TCGATCTGGC GCCGCACCTG AGCGATTTTC AGGCCACTGC AGGGATCATG
CAGCAGCTTG ACCTGATCAT CAGCATTGAC AGTGCCCCGG CCCACCTGGC CGGTGCACTG
GGACGGGAGA CCTGGCTGCT GCTGCATCAG GCCCCTGACT GGCGCTGGGG CCTCCAGCAC
GCAGATTCAG ACTGGTACCC CACCATGCGG CTCTTCCGCC AGCCGGCAGG TGAGTCGTGG
CAACCGGTGA TTGATCAAGT GGTCGAAGCC CTGGAGCAGC GGCTCAACAG CAGCGCCGCC
AGCATTCCGG TTGCGGACAC CGGCGACCTG CTGACACTGG GGGACCGCTT GCGTGAGCAG
GAACAGTGGA GCGCAGCGCA CCATCTCTAC CGGCTGGCTG CCTGGCTGGC ACCGAACAAC
TACCGTGCAG CGCTCTGTGC AGGCGGATGC CTGATGTTTC TCAATCGTCC TGACGAGGCA
GCCACCTGGT TCCGGCAGGC CATTGCATTA AACCCGGAAG TGGCTGATGC CCATATCAAT
CTGGGCATGG CCTTGCTGAG CAGCGGCAAC CTGCAGGAAG GCTGGCGCGA GTTTGAATGG
CGCAGCTGTG CCATCACCGC GCAGCTGCCC CCTATTCCCG CCCTGCCGGT CATACCGCCC
AACAGCCGTC TTGACGGTAC GACGGTCCTT ATCCATGCCG AACAGGGATT GGGCGACCTG
CTGCAGTTCG CCCGCTACCT GCCGCTGCTG GCAACAACCG GGGCGCAGAT TATCGTCAGT
GTCCCGGCCG TGATGCAACG CCTGATAGCC GGTCTGACCG GCGTCAGCCG GGCCGTCTCC
CATGGCGAAC TGCTGCCTGA GGCTGACTAT CAGCTCCCGC TGCTTTCCCT GCCGGAATGT
CTGTCAGAGC TGGTGCCCGC CATCCCTGTC CAGGTACCGT ACCTGTTGCC TGATCCAGCC
CTGCAAGCGG CATGGCAGTC ACAGCTTGCC GACAACGGCG TACTCAAGGT CGGCCTGATC
TGGCGCGGCA GCAATCTGGG GAAAAGCGGT TACAGCAGGG CTCTGACCAC AGAACTGCTG
CGTCCCCTGA CAGAGGTGGA ACAGACCACC TGCTACAGCC TGCAACTTGG CGCCAGCAGC
GAAGAGCTGT CCCAACTGCC CGGCATCATT GATCTGGCAC CGCAGATTAC TGATTTTGCC
GATACGGCGG CCATCATGGT CAATCTTGAT CTGGTGATCA GTGTCGATAC CTCCACCGCC
CACCTGGCCG GTGCCCTGGG CTGCCGCTGC TGGGTACCGC TCCTGTTTGC GCCTGACTGG
CGCTGGTATC CGTTGCATGA CCAAGGCAGC CGCTGGTATC CCTCCCTGAC CACTTTCCGC
CAGCATATAC CCGGCCGGTG GCAGCCGGTT ATGGCTGAAC TTGCCGCTGC CCTGCAGGGT
GAGGCGTTAT TGTACCAAGG GCACCAACTT GGCAGGACGG GCAGAAGGGA AGAAGCAATT
GAAAAATTCC GGGCAGCGGC TGTACTCCCA GACAGAAACG GGCCCGCCTT TTTGAATCTC
GGCATCTACC TGCGGGCCGA TGGTAAGCTA CTACAGGCAA AAGAGGCCTT ACTGCAGGCG
ACCCAGGCAG ATCCGGGCTA CCCGGAGGCC TGGCAAAACC TGGGACTGAC CCATCAGGGA
CTGGGAGAAC TGCCTGAGGC CTATACCTGC CTGAAACGGG CACTGACCCT CAGACCTGAC
TACAGCACTG CCCGCTGGAA CCTGGGGCTA CTGCAACTAT TGTTGGGGGA ATACCGGCCT
GGATTTGAAA ATTTCGAAGC GCGTTTCACC AAACTTGGAG CCGTGGCCCG GCTGCACAAC
ACCATCCCGG CCTGGGACGG CACTTCATAT CCCGGCAAAA CAATCCTGAT TCATGCGGAA
CAGGGCTACG GTGACACTCT TCAGTTCGTA CGCTTCATTC CGATGGTCAC TGAAAGGGTG
GGGAAAGTGA TCCTTGAGGT GCAGGATAAC GCCTTGCGTG AACTCTGCCA AAGCGTACCA
GGGGTTACAA CAACCATTGT ACGAGGTGAG ACGCTACCGG CAATTGACTG CCAGGCCCCG
CTGCTATCGC TCCCCCGGCT GCTGAAAATC TCATTAGAGA CGCTGCCGCA CAAGATTCCG
TACCTGACTG CCGATAAACA AAAAACAGGG TACTGGGAGA GCAGACTCCC CCATGATGGC
CGACGCAGGA TCGGCATCTG CTGGAAAGGA CGGCCAACAC CCGACCCGCA GCGCTCAATC
CCGTTTGATG AGTTGCGACC TCTTTTTGAG CTGGCAGGAA CCTGCTGGAT CTCGCTGCAG
GCGGAGCAGG ACCAGACCGC TCGCCTCCCG GAGGTGATGA TTGACCTTAG CAATGAGATT
AACGATTTCT CCGATACCGC AGCGATTATG GGCTATCTGG ACCTGGTGAT CAGCATTGAC
TCGGCGGTAG CTCATCTGGC CGGTGCCCTG GGGGCACCCG GCATCGTGCT GCTCCCCTTT
GCACCTGACT GGCGCTGGGC CCTGGATCAA CCCCACAGCC CCTGGTATCC GGGATTGCAA
CTGTTCCGGC AACCGGCCCC GGGAGCATGG AAACCGGTAA TTACGGCCCT GTGCAACGCC
CTGACACAAC CATCTCCTGC CGAGGCATCA CGTGGATAA
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| Protein sequence | MNRHQRPKGS VAVWYRLGTR QLRQNRPDDA AASFRQALAQ DPMLAAAWHN LAHACQQMRQ
YDHALVSYRR ALQYCPNDAC SLNNLGVLLR ELGRLDESLQ VLGQLVSLYP DDGDGHWNLA
LSLLMTRRYP EGWQEYEWRF RRTLPVRVHD PGSPRWQGEA LEGKTILLCC EQAYGDSIQF
VRFAAGLADW GATVLLHCPD QSLAQLLAGA PGVSRTMTPD EPLPPHDCWS PLLSLPLYLQ
TSQESIPACP YLFAGKTASQ PVLSGTGLKV GLVWSGRSTD PQRACPVQLL APLARFSRQV
TFFSLQLNST RHDLDLLQHL LGIIDLAPHL SDFQATAGIM QQLDLIISID SAPAHLAGAL
GRETWLLLHQ APDWRWGLQH ADSDWYPTMR LFRQPAGESW QPVIDQVVEA LEQRLNSSAA
SIPVADTGDL LTLGDRLREQ EQWSAAHHLY RLAAWLAPNN YRAALCAGGC LMFLNRPDEA
ATWFRQAIAL NPEVADAHIN LGMALLSSGN LQEGWREFEW RSCAITAQLP PIPALPVIPP
NSRLDGTTVL IHAEQGLGDL LQFARYLPLL ATTGAQIIVS VPAVMQRLIA GLTGVSRAVS
HGELLPEADY QLPLLSLPEC LSELVPAIPV QVPYLLPDPA LQAAWQSQLA DNGVLKVGLI
WRGSNLGKSG YSRALTTELL RPLTEVEQTT CYSLQLGASS EELSQLPGII DLAPQITDFA
DTAAIMVNLD LVISVDTSTA HLAGALGCRC WVPLLFAPDW RWYPLHDQGS RWYPSLTTFR
QHIPGRWQPV MAELAAALQG EALLYQGHQL GRTGRREEAI EKFRAAAVLP DRNGPAFLNL
GIYLRADGKL LQAKEALLQA TQADPGYPEA WQNLGLTHQG LGELPEAYTC LKRALTLRPD
YSTARWNLGL LQLLLGEYRP GFENFEARFT KLGAVARLHN TIPAWDGTSY PGKTILIHAE
QGYGDTLQFV RFIPMVTERV GKVILEVQDN ALRELCQSVP GVTTTIVRGE TLPAIDCQAP
LLSLPRLLKI SLETLPHKIP YLTADKQKTG YWESRLPHDG RRRIGICWKG RPTPDPQRSI
PFDELRPLFE LAGTCWISLQ AEQDQTARLP EVMIDLSNEI NDFSDTAAIM GYLDLVISID
SAVAHLAGAL GAPGIVLLPF APDWRWALDQ PHSPWYPGLQ LFRQPAPGAW KPVITALCNA
LTQPSPAEAS RG
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