Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3352 |
Symbol | |
ID | 6365958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3586806 |
End bp | 3588020 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642678772 |
Product | TPR repeat-containing protein |
Protein accession | YP_001953578 |
Protein GI | 189426401 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000220615 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTG ATTTTTCAGA TAACGTACAG AAAATGTTTT CTGCGCTGAC TTCTGCAGCA GACCTTCGCA CAAATGTCGC TAATACCTTG CTTTCGAGTG GTATCAATCT GATGCAGAGC CAGAAGTACA GCGAGGCCGC CTCAGCTTTC AGGCAGGCCG CTGCCATGCA GCCCGATCTT ACCGAGGCTT ATACGTATCA GGGCGATGCT TATGCCCGCC TGGGTAAGCG TAAAGAGGCG ATTGATGCCT ACAAGATGTC TCTGAAGGTG GATAAGACCC AGGATACGGT TTACACCACT CTGGCTGGTG TCTATATTGA TAATGGTCAG AAGAGCGAGG CTGAAAAGGT TCTCAAGGAC GGCATTAAAC AGAATAATCA GAACACCTTG GCATATTACA TGCTGGGTCA GTTACAGGCT CAAAATGGGG ATTATACTTC GGCCGAGGCC AATTTCCGGC AGGTTATCAA GCTGGAGCCC AAGGACGGCA ACGGTTATTA TGCCTTGGGA ATGGCGCTGA ACGGACAGGA AAAATACGAC GAAGCAGTTG AGGCACTTCA AAAGGCCACA GATCTCAAGG CAGATTTTTC GCCGGCTCTG CTTGAACTCG GCAGGGCGTA CGCAGGGCTT GGAGAAAAGG ACAAGGCCCA GGAAATTGTT GATACGCTGA CTGAAATTGC CACGTCAGAT TCGTTGCTCT CAGCTGAAGA GCTGGCTGCA GAGATCAAGC AGCCAAAGAT TTCCTACTAC AACAGTACCA AGAGCTCTTT GAAGCTTGAT TTGTCGGCTG TGAATCTGGT GGCACTTTCG TCGGCGTTTA TGGAGCCCAG TGCAACTAAA GACTTTACCG TAAAATTTGC CTTTGATTCA GAAATGGATA TCAGCTCAGT GGTGGACCCG CTGAACTGGC GGATCAGCAA GGCATCTGGT GGTACCACAG GTCTCTACAA CAATGGATTA TACAGCGCAC GGGATACCTC GGTGCCTTAT CTTCCCAAAA GTGTCTCCTA TGATCCGACA ACCCGACAGG CAACCCTGAC CTTTACGCTA CGTCAAAAGG CAGATACCAA CGGAGGTACT TTTGATCCTA TAACTGAAGG AGGCATTCTT GATCCCAGCC ACCTTGTCTT TAAATTTTTG GGGAAAGATG CGAACGGTAA GTCGATGGAT CCGACTGCTG ATCAGTATGA AGCCTGGAAA GGCGAAGTGT TTTAG
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Protein sequence | MAFDFSDNVQ KMFSALTSAA DLRTNVANTL LSSGINLMQS QKYSEAASAF RQAAAMQPDL TEAYTYQGDA YARLGKRKEA IDAYKMSLKV DKTQDTVYTT LAGVYIDNGQ KSEAEKVLKD GIKQNNQNTL AYYMLGQLQA QNGDYTSAEA NFRQVIKLEP KDGNGYYALG MALNGQEKYD EAVEALQKAT DLKADFSPAL LELGRAYAGL GEKDKAQEIV DTLTEIATSD SLLSAEELAA EIKQPKISYY NSTKSSLKLD LSAVNLVALS SAFMEPSATK DFTVKFAFDS EMDISSVVDP LNWRISKASG GTTGLYNNGL YSARDTSVPY LPKSVSYDPT TRQATLTFTL RQKADTNGGT FDPITEGGIL DPSHLVFKFL GKDANGKSMD PTADQYEAWK GEVF
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