| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3327 |
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| Symbol | |
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| ID | 6365923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 3561810 |
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| End bp | 3563891 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642678747 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001953553 |
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| Protein GI | 189426376 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.166514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATA CCAGCATACC CTACAAACAG GTTTTTTCAG CAATCCCGGC ACCGGTGATT
ATGCTGGACA CTCAGGGGCA CTTTGCCTTT GCAAACAAGG CCGCCTACCA GATTCTCCCC
TCCTGCATCC CTCTCGACGA CGGGGTAAGC TGCACACCAC CAGACTGGCT TGCCACTGAA
ATAGATACAT TCCTGTATCA TGCCAAAGAA GAGCATACAT TCGAACACTG CCTGCCACTT
GACACGGGGC ACCGTCATAT CCAATTCACC CTGACCCGGT TGGACCAGGA CAAGCGCCAG
AACGGCATCC TGATTACACT GCACGACATC AGCCGACACA AGCGGGCCGA GCAGGCCCTG
CGCCTAAGCG AAGAACGGTA CCGCATGCTG GTTGAACATC AGAGTGATCT GGTTGTCAGG
GTTGATATCG AAGGCAGACT GCAGTTTGCC AGCCCCTCCT TCTGCATGCT GTTCGGCATT
GACGAAGAAC AGCTGGTGGG GCGGGAGCTC TGCCCGATCA TCAACAGCAG CGGTCAGGCG
GTTATGAAAG AGGCCATGCA GCGCCTGGAC TGCCACCCCA AGTCCTGTTA TCACGAAATC
TGCTCCCAGA CCCTGGATGG TCTCCGCTGG ATCGGCTGGG CCATGAAGGG GGTGGTGGAT
GAAAAGGGCC ATATTGAGGC CATCGTCGGT ATCGGGCGCG ACATTACCGA CCGCAAAAAG
GCCGAGCAGG AGATACTCCA GCTTGCCCAT TACGATACCC TGACCGGCCT GCCTAACCGC
AGCCTGCTCC AGGACCGCTT GTCCCAGGCC CTTTCGCTGG CCAACCGGGG CAATGTCACC
CTGGCGGTAC TTTTTCTCGA TCTGGATCGT TTTAAGCACG TCAATGACGC CTTTGGTCAC
CAGATTGGCG ATCTGTTGCT GCAGGAGGTC AGCCGCCGCC TGAAAGACTG CGTGCGTGCC
ACCGACACAG TATCCCGGAT CGGCGGCGAT GAGTTTGTGA TCATCCTGAC CAATCTGATC
AAGTGCAGCC AGGCCGGATC AATAGCCGCC AAGATCATCA GCTCCATGAG CCGCCTCTTT
CAGCTGGGAG GCCATGAACT GTACAGTGGC ACCAGCATCG GCATCGCCCT CTACCCGACA
GACGGCAATG ATGTTGACAC CCTGCTGAAG CATGCCGATA TGGCCATGTA CCAGGCCAAA
GCGAGTGGCC GGGGCACCTT CAAGTTCTTT TCTCCGGAAC ACAACGAGAA AATGCTGCAG
CGTATGCAAC TTGAACAGGC GTTACGCCGG GCAATTGAGC ATCAGGAGCT GTCCCTTGAC
TACCAGCCAC AGATCGACAG TGCAACCGGC AGCATCAACG GCCTTGAAGC CTTGCTGCGC
TGGCAGCACC CCCAGCTGGG GCTGTTACTG CCGGGACTGT TCATCACCAT TGCAGAGGAA
ACCGGACTGA TCATCCCGTT GGGGGAATGG GTATTACGGA CCGCCTGCAG GCAGGCACGG
GCCTGGCAGC GGGCCGGCTA CCACCGGCTG CGGATAGCGG TCAACATCTC TCCGCGCCAG
TTCCAGCAAC GGGGTCTGAT ACCGATGATC GACGCAATCC TGCAGGAAAC CGGCTGCGAT
CCGCGCGGGC TTGAACTTGA GCTGACCGAG ACCACCCTGA TGGACAGCCC CAAGGAAGCG
ACTGCCCTGC TGAAGGCGTT GAAACGCCGC GGGATCAGTC TGGCTATTGA CGATTTCGGC
ACCGGCTATT CATCGCTCAG CCACCTCAAG CACTTTCCGA TCGACCGGCT CAAGATCGAC
CGGTCCTTCG TCAATGATCT GACCCGCAGC CGCGAGGATA GCGCCATTGT CGAGGCAATC
ATCGCCATGG CCCACCGGCT GGGGCTGGAG GTAGTGGCCG AAGGGGTGGA ACATCCTGAT
CAACATGCCA TACTCAGCGA CTGGGGCTGC AAGACATGCC AGGGCTTTCT CTACAGCAAG
GCCGTTTCAA CCGAAGAGGC AACGGCACTA CTAGCCACAG CTCAGTATTC CACAGGGATC
CCAAGCACTT TGACGCCCCA GACAAAACCA GCAGACGATT GA
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| Protein sequence | MPDTSIPYKQ VFSAIPAPVI MLDTQGHFAF ANKAAYQILP SCIPLDDGVS CTPPDWLATE
IDTFLYHAKE EHTFEHCLPL DTGHRHIQFT LTRLDQDKRQ NGILITLHDI SRHKRAEQAL
RLSEERYRML VEHQSDLVVR VDIEGRLQFA SPSFCMLFGI DEEQLVGREL CPIINSSGQA
VMKEAMQRLD CHPKSCYHEI CSQTLDGLRW IGWAMKGVVD EKGHIEAIVG IGRDITDRKK
AEQEILQLAH YDTLTGLPNR SLLQDRLSQA LSLANRGNVT LAVLFLDLDR FKHVNDAFGH
QIGDLLLQEV SRRLKDCVRA TDTVSRIGGD EFVIILTNLI KCSQAGSIAA KIISSMSRLF
QLGGHELYSG TSIGIALYPT DGNDVDTLLK HADMAMYQAK ASGRGTFKFF SPEHNEKMLQ
RMQLEQALRR AIEHQELSLD YQPQIDSATG SINGLEALLR WQHPQLGLLL PGLFITIAEE
TGLIIPLGEW VLRTACRQAR AWQRAGYHRL RIAVNISPRQ FQQRGLIPMI DAILQETGCD
PRGLELELTE TTLMDSPKEA TALLKALKRR GISLAIDDFG TGYSSLSHLK HFPIDRLKID
RSFVNDLTRS REDSAIVEAI IAMAHRLGLE VVAEGVEHPD QHAILSDWGC KTCQGFLYSK
AVSTEEATAL LATAQYSTGI PSTLTPQTKP ADD
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