| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3236 |
|---|
| Symbol | |
|---|
| ID | 6366195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3464542 |
|---|
| End bp | 3465813 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642678653 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_001953462 |
|---|
| Protein GI | 189426285 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGACG TGAAATTTAT CCGTGACAAC CTTGACCAGG CCGAGGCCGC CCTTGCCACC
CGCGGCGGCG CCATCTCGCT GGCCCGCTTC CGCGAACTGG ATGCGCAGCG CCGCAAACTG
CTGACCGAGA GCGAAACCCT CAAGGCCTTG AAGAACAGCG TCTCCGAAGA GATTGCCAAG
GTGAAGGACA AGAGTACGGT CAAAGACAAG ATTGCCGAGA TGAAAGAGGT CTCTGCCAAA
ATCAAAACCT TTGATGATGA GTTGAAGATT GTCGAGGAAG AGTTTGACAC CCTGCTGATG
ACCATTCCCA ACCTGCCGCA CCCCACCACG CCGGTTGGCA AGTCGGAAGA AGAAAACGTG
ATTGTGCGTA GCTGGGGCAG CCTGCCCGAA ATGGCATTTG AACCCAAACC GCACTGGGAT
CTGGCAGAAG ATCTGGATAT CCTTGATTTT GAACGGGCCA CCAAGATCAC CGGCGCCCGT
TTCTGCCTCT CCAAAAGGGC CGGGGCGCGG CTGGAACGGG CCCTGATCAG CTTTATGCTT
GACCTGCACA GCACGGAACA CGGCTATACC GAAGTACTGC CCCCCTTCAT GGTCAACCGG
GCCAGCATGA CCGGCACCGG ACAGTTACCC AAGTTTGAAG AGGATCTGTT CCGTCTGATG
GATCCTGAAT ACTTCCTGAT CCCCACTGCC GAGGTGCCGG TTACCAACAT TCACCGCGAT
GAAATACTGA AAAAATCAGA TCTGCCGATC AGCTACACCG CCTACACCCC CTGCTTCCGC
AGAGAGGCCG GTTCCTATGG CAAGGACACC CGCGGCCTGA TCCGTCAGCA CCAGTTTAAC
AAGGTGGAGC TGGTCAAGTT TGTACACCCT GATGAATCCC AGGCAGAACT GGAAAAGCTG
ACCGGCCATG CTGAAAAGGT ACTGCAACTG CTGGAGCTGC CCTACCGGGT GATGGCGCTC
TGTTCCGGTG ATATCGGCTT TTCAGCCTGC AAGACCTATG ACCTCGAAGT CTGGCTGCCC
AGCCAGAACA CCTACCGTGA GATCTCCTCC TGCAGCAGTT TTGGAGATTT CCAGGCCCGC
CGGGCCGGTA TCCGCTTCCG GGAGGATGAA AAGAGCAAAC CGGAATTTGT CCATACCCTG
AACGGCTCCG GTCTGGCTGT TGGCCGGACC CTGGTGGCTA TTCTGGAGAA TTACCAGCAG
GCCGATGGCT CGATTATTAT CCCGACTGCG CTACGCCCTT ACATGGGCGG CATAGAAAAA
ATCACCAAAT AG
|
|---|
| Protein sequence | MLDVKFIRDN LDQAEAALAT RGGAISLARF RELDAQRRKL LTESETLKAL KNSVSEEIAK
VKDKSTVKDK IAEMKEVSAK IKTFDDELKI VEEEFDTLLM TIPNLPHPTT PVGKSEEENV
IVRSWGSLPE MAFEPKPHWD LAEDLDILDF ERATKITGAR FCLSKRAGAR LERALISFML
DLHSTEHGYT EVLPPFMVNR ASMTGTGQLP KFEEDLFRLM DPEYFLIPTA EVPVTNIHRD
EILKKSDLPI SYTAYTPCFR REAGSYGKDT RGLIRQHQFN KVELVKFVHP DESQAELEKL
TGHAEKVLQL LELPYRVMAL CSGDIGFSAC KTYDLEVWLP SQNTYREISS CSSFGDFQAR
RAGIRFREDE KSKPEFVHTL NGSGLAVGRT LVAILENYQQ ADGSIIIPTA LRPYMGGIEK
ITK
|
|---|
| |