| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3212 |
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| Symbol | |
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| ID | 6366002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3433941 |
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| End bp | 3437327 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642678629 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001953438 |
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| Protein GI | 189426261 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACAT CACTGCCGGA TTATTTCCCT TATGCCATTC AGGTTGCTGC GCGCGCGCAA
CAACGTTTTG GTGTCGAGGC GTTGTTGGCT CACAGTGACA ACAATTATCC CCAGATACTG
TTCTATCGCC GGCTGGCCTC TGCCCTGACC AGGTCAGGCG ATCCTCCTGC CACGGTTACT
GCTGCCCAGC TCAACCTGTA TGCTTCGCTT TTGCGGATTT ACCGTCACCT GATCGATGAT
ATCTGCCGTG GCGGACAGAC ACCTCTGCTG GCTGATGCCC TGAGGAACGC TGGACTGAAT
CCTGCCGGTA GACAGGTCAG GCAGACGTTT GATGCCTTTG TGGAAATGTT TCCGGCCGGT
TGCGTGCTGA CTGCGCTGAC ACAGGAACAA CGCGAATACC TGTTGTTGCG TGAGTTGCTG
CTGCTCAACC TTGCAACCCG GAACCGGGCA CTTGAGCCTT TTCGCGTGTT GCTGGATGAT
CAGGAGCTGG CGTCGAGTGC CCCGTATCGC CAGGTAGTTG CCGGGCTTGA GCAGTCGTTG
GCAAAAGGGC CGCTGCTGCC TGTAATCGGT GTGACCCTGG TTGAGGCCTT GTATGCCCCG
TTGAGTGCAG CCCCGGATTC TCTGGCAGGG CAGCTTGGCT ATATCCGGGA ACAGTGGGCT
GAAGCCCTGC CGCCGGAGTT GCTGGAAGAA CTGCTGACCG CCTTTGATAT CCTGGACGAA
GAACAGCGCC AGTGGTCGGA TGGCGGTGCC GGTCCTGCGG AGGTACTGCA GTTCGGTTTG
CCGGGCGCTG CTGGTGCAGC TGCAATCTTT GGGGCTGTGC CGGGAAGTGC CTACCATGGC
GCCGGTCACC ATGCAGGCTA CGACCAGCCG GAGTATGAGG CCTTTTCAGC CGATGCCGAC
TGGATGTCCA ACGTGGTGAT GATCGCCAAG ATGACCCATG TCTGGCTGGA TCAACTCTCC
AAATCCTACG CCTACCCCAT TACCCGTCTT GATCAGGTGC CGGATGCCGA ACTTGACCGT
CTGGCCTCAT GGGGCTTCAC CGGCCTCTGG CTGATCGGTC TCTGGGAACG GTCGTCTGCC
TCACAACGAA TCAAGCAGTT GTGCGGCAAT CCTGAGGCCC ATGCCTCAGC CTATTCGTTG
TATGATTATA CCATCGCAGC AGACCTGGGG GGGGAGCCTG CCTTTCTGAA TCTGAAACAG
CGAGCCTGGC AGCGTGGTAT CCGGCTTGCC AGTGATATGG TTCCTAACCA TACCGGTCTC
TTTTCCCGCT GGGTGCTTGA ACATCCTGAC TGGTTCATTC AGACTGACTA CGCCCCGTTT
CCCACCTACC AGTTTAACGG TGAAGATCTT TCCCCTGATC CGTCAGTTAC GCTTCAAATT
GAAGACGGCT ACTGGAACAA ACAGGATGCG GCGGTGGTCT TCAGGATGAT TGACCGCCGG
GATAACCGTA CACGCTACAT CTACCATGGT AATGACGGCA CCAGTATCCC CTGGAACGAC
ACGGCTCAGC TGAACTACCT GATCCCGCAG GTGCGGGAGA CCGTTATTCA GACGATCCTG
CATGTGGCCC GGCTGACCCC GATCATCCGC TTTGATGCGG CCATGACCCT GGCCAAGAAA
CATTACCAGC GGCTCTGGTA CCCGCAACGG GGGTTGGGGG GCGGTATCCC TTCCAGGGCT
GAGCATGCCA TGGGGCGCGA TGAGTTTGAT GCGGTCTTTC CGGTTGAGTT CTGGCGCGAA
GTGGTGGACC GGATGGCACA GGAAGCACCG GATACCCTGC TGCTGGCCGA GGCGTTCTGG
ATGATGGAAG GCTACTTTGT CCGTACGCTG GGGATGCACC GGGTCTATAA CTCGGCCTTC
ATGAACATGC TGAAGCAGGA AGAGAATGCC AAGTATCGCC AGACCGTCAA GAACGTGCTG
GAGTTTAACC CCGAGATCCT GAAGCGGTTT GTCAACTTCA TGAACAACCC CGATGAGAAG
ACTGCGGTGG AGCAGTTTGG CACCCAGGGC AAGTATTTCG GGGCCTGTGT GCTGCTGGCG
ACCATGCCGG GCTTACCGAT GTTCGGCCAC GGCCAGATTG AAGGGTTTCA TGAGAAATAC
GGCATGGAAT ATCGCCGGGC CTATTGGGAT GAGACGGCGG ATCAGGGGCT GCTGCGCGGG
CATGAACTCT GGATCTTCCC GCTGCTGAAG CGGCGCAGGC TTTTCTCCGG CTCAGAACAT
TTTGCCCTGT ATGATTTTTA CTGCCATGAC GGCAGTGTGG ATGAAAATGT CTTTGCCTAC
AGCAACCGCG CAGATGAGCA AAGGGCATTG GTGCTGTATA ACAACCGATA CGCCAGGACA
GCCGGGTGGA TCAAGACCGC TGCTCCGGTT GCTGCCAGAG CCGGGGATGA TGCGCCCCTA
TTGTACACCG GCAGCCTGGG GCAGGCCTTG GCAGTGCCGG ATGACACCCG TTGTTTTCTG
GCCTTCCGTG AAATTTCCAC GCAGCATGAA TATCTGCGTA ACGCAGCTGA GATCTGCCGG
CGCGGGATGT ATGCCGAACT TTCTGAGTAT GAATTTCACG TCTTTCTTGA TTTCAGGATC
CTTGAAGACA CGCCTGACGG CGAGTGGGCT GCGCTCTGTA CGCATCTGGG CGGGCGTGGC
GTGGTCTCGC TTGAGGAGGA ACGGGTGCAG CTGGCCAACC AGCCTCTGAT TGCAGCCTTT
ACAGCCTGTC TGCAGGCGAT ACCGCAGATG GCACTGCTGG AGAAGGCCTT TCAGGGCTAC
TGTGCGGAGC TGCCTGCGCC TGCAGCGTCA GAAATAGACC GGCAGCACCT GATGGACGTT
CTGGAGGCGG CACTTCAGCC GGCACTTGCT GCTAAGACCC TGCGGCTGCT GCGTAAGAGC
GGTGTAAGCA GACAGGCATT ACCCCTTGGT CAGAAAAATC GTCGTCAGGC CATGGCCATA
CTGCTGACAG GTCACCTGGC TGTGCCATTG AGCGATGATG CCTTGCATGA GTACGGCTTG
GGGCGTCCTC TGGCGGCCTT TGTAGCAGGA GAAGAACTGG TGGAACGCCA TTCCGGGGCG
TGGACTGTTG AGCTGTGCGC TGCAGCCGCT GTGGCAGGGA GGATCTGGTC CACAGGGGCT
GCAGACCGTG TGGACCAGCT GTTCAGCAAT CCGCTGTTGC ACCGTTTCCT GTTGGTGCAT
GAGGATGCTG GTGTGGTCTG GTTTAATAAG GAGCGGTTTG AAGAGCTGCT TACGTGGCTT
GCATTCCAGG CGGCCTTTGA GCAGGCGCGG GGAGAAGGAC ATCTGCTGGT GCCGGTGAAG
GCGCTGGAGG CGCTGGCCAA GGCGGCAGGT TACCGCGTGC GCCCATTGCT GCAGCTGGCA
GAAGGGCTTC AGGAAGGAGG GCTGTAA
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| Protein sequence | MSTSLPDYFP YAIQVAARAQ QRFGVEALLA HSDNNYPQIL FYRRLASALT RSGDPPATVT
AAQLNLYASL LRIYRHLIDD ICRGGQTPLL ADALRNAGLN PAGRQVRQTF DAFVEMFPAG
CVLTALTQEQ REYLLLRELL LLNLATRNRA LEPFRVLLDD QELASSAPYR QVVAGLEQSL
AKGPLLPVIG VTLVEALYAP LSAAPDSLAG QLGYIREQWA EALPPELLEE LLTAFDILDE
EQRQWSDGGA GPAEVLQFGL PGAAGAAAIF GAVPGSAYHG AGHHAGYDQP EYEAFSADAD
WMSNVVMIAK MTHVWLDQLS KSYAYPITRL DQVPDAELDR LASWGFTGLW LIGLWERSSA
SQRIKQLCGN PEAHASAYSL YDYTIAADLG GEPAFLNLKQ RAWQRGIRLA SDMVPNHTGL
FSRWVLEHPD WFIQTDYAPF PTYQFNGEDL SPDPSVTLQI EDGYWNKQDA AVVFRMIDRR
DNRTRYIYHG NDGTSIPWND TAQLNYLIPQ VRETVIQTIL HVARLTPIIR FDAAMTLAKK
HYQRLWYPQR GLGGGIPSRA EHAMGRDEFD AVFPVEFWRE VVDRMAQEAP DTLLLAEAFW
MMEGYFVRTL GMHRVYNSAF MNMLKQEENA KYRQTVKNVL EFNPEILKRF VNFMNNPDEK
TAVEQFGTQG KYFGACVLLA TMPGLPMFGH GQIEGFHEKY GMEYRRAYWD ETADQGLLRG
HELWIFPLLK RRRLFSGSEH FALYDFYCHD GSVDENVFAY SNRADEQRAL VLYNNRYART
AGWIKTAAPV AARAGDDAPL LYTGSLGQAL AVPDDTRCFL AFREISTQHE YLRNAAEICR
RGMYAELSEY EFHVFLDFRI LEDTPDGEWA ALCTHLGGRG VVSLEEERVQ LANQPLIAAF
TACLQAIPQM ALLEKAFQGY CAELPAPAAS EIDRQHLMDV LEAALQPALA AKTLRLLRKS
GVSRQALPLG QKNRRQAMAI LLTGHLAVPL SDDALHEYGL GRPLAAFVAG EELVERHSGA
WTVELCAAAA VAGRIWSTGA ADRVDQLFSN PLLHRFLLVH EDAGVVWFNK ERFEELLTWL
AFQAAFEQAR GEGHLLVPVK ALEALAKAAG YRVRPLLQLA EGLQEGGL
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