Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3107 |
Symbol | |
ID | 6367637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 3326862 |
End bp | 3327929 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642678519 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001953333 |
Protein GI | 189426156 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.128244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCAC AGGTCTGGCA GCATGCCGGC TGTTATGGTA TGAACAGATA TGCACGCGCT ATGAAGTCAA AAGGGAGTAG CAGGATGAAA AAAAAGGTAC TGATTGGTCT GCTTGCTGTT TTGGTGCTGG GAGTGCTGGC TGTAATGGTT ATGCGCCGTA CGCAGGCTGC CAACGGGAGG CTCAGGCTAA CCGGCACGAT AGAGGCCACC ACGGTAGCGG TTTCATTCAA GGTGCCGGGC CGTCTCAAAG AACGGTTGGT GGATGAAGGG CAGCAGGTCA GGGCCGGTCA GGTTGTAGCC CGGCTGGAGG ATGACGAGCT GAAGGACGAG CGTTTGGCCC GTGCCGCTGA TCAACAGGCA GCTCAGGCTG TGCTTGCCGA CCTGAGGGCC GGTAGCCGCC AGGAGGAGAT TGCCGCCACT GCTGCCACCC TTGCCCGGCT CAAGGCCGAA TCAGAGCGGG CCGCCCAGGA TGCTGTCCGG GCCGAGGCGT TGTTCAGGAA AGAGGTGATT CCCCGCAAGG AGCTGGATGC TGCCCGGGCA GTCAGGGATG CTGCCGCTGC GGCGGTGCGT GAGGCAGAAC AGCGCCTGCA GCTGGCCAAG GCCGGTCCCC GGCCTGACGC GGTGCGGGCC GCCCGGGCCC GCCTGGAAGG GGCAACGGCA TCCCGTTCAC TGGCCGATAT CCGCTTGTCC CAGGCGGTGC TGGCCGCTCC GCTCAACGGT ACGGTGCTTG CTAAACATGC CGAGCCGGGT GAGCTGCTGG CTGCCGGCAG CCCGGTGATC ACTGTGGCCC GTCTCGACGA GGTCTGGGTG CGGGCCTTCC TGCCGGAGCC CCAGTTGGGC AAGATTAAGC TGGGTCAGCA GGTTTCCGTC AGCAGTGATA CCTGGAAGGG GCGCACCTAT CAGGGCACGG TCAGCTTCAT AGCCTCCGAG GCCGAATTCA CCCCGCGCAA CGTACAGACC GAGGCTGAAC GGGTCAAGCT GGTCTATCGT ATCAAGGTCA CGATTGCCAA TCCGAAGCAG GAACTGAAGC CGGGCATGCC GGTGGATGCG GTGATTACGA TGCCATAA
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Protein sequence | MPAQVWQHAG CYGMNRYARA MKSKGSSRMK KKVLIGLLAV LVLGVLAVMV MRRTQAANGR LRLTGTIEAT TVAVSFKVPG RLKERLVDEG QQVRAGQVVA RLEDDELKDE RLARAADQQA AQAVLADLRA GSRQEEIAAT AATLARLKAE SERAAQDAVR AEALFRKEVI PRKELDAARA VRDAAAAAVR EAEQRLQLAK AGPRPDAVRA ARARLEGATA SRSLADIRLS QAVLAAPLNG TVLAKHAEPG ELLAAGSPVI TVARLDEVWV RAFLPEPQLG KIKLGQQVSV SSDTWKGRTY QGTVSFIASE AEFTPRNVQT EAERVKLVYR IKVTIANPKQ ELKPGMPVDA VITMP
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