Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3072 |
Symbol | |
ID | 6365876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3290660 |
End bp | 3291463 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642678484 |
Product | thiamine biosynthesis protein ThiF |
Protein accession | YP_001953298 |
Protein GI | 189426121 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.868681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACATCC GCATTAATGA ACAATCTGTC AGCATGACAC CCCCCTGCAG CCTGGCCGGG GCAGCGCAGC AGTTTAAACC CGGCGCCGAT CTGCTGATCC TGAACGGTTT TCCCGCTGAA CCGGAAACGC TGCTGCAGGA GGGGGACCAG CTGTTCCTGA TCAAACGGGG GGAGCAGCCG TCAGCCGATG AGCTGGAGGC GTTGATGGCA GCCCGCCACA CCCCCGGCAT CCATGCCCGC CTGAAACAGG CCTGTGTCGG TATTGCCGGT GCGGGCGGCC TCGGTTCGGC CGTGGCGGTT GCCCTGGCGC GGATCGGGGT CGGCCGCCTG ATCATTGCCG ACTTCGACCT GGTCGAGCCG TCCAACCTGA ACCGCCAGCA GTATTTCATC GACCAGATTG GCCTCTACAA GGTGGCGGCG CTGACGCAGA ACCTGCAGCG GATCAACCCC TATATCAGCG TCGAGCCGCA TCAGGCCCTG CTGGGGCCGG ACAATATCCC GCAGCTGTTT GCCCCCTGCT CCGTGGTGGT GGAGGCCTTT GACCGGGCCG ACATGAAGGC GATGCTGGTG GACACGGTGC TTTCCTGCCT GCCGGGCTGT TGCGTGGTGG CAGCATCAGG GGTGGCAGGC TATGACGACA ACAACAGCAT CACCACCCGC AGGATCTCAT CAAGGCTGTA TCTGGTGGGT GACGGCGTGT CGGAGGCCCA ACCGGGCAAC GGCCTGATGG CCCCCAGGGT GGCCATTGCC GCCGGTCATC AGGCAAATCA GGTGGTACGG ATCATCCTGG GAGAGCGATC ATGA
|
Protein sequence | MNIRINEQSV SMTPPCSLAG AAQQFKPGAD LLILNGFPAE PETLLQEGDQ LFLIKRGEQP SADELEALMA ARHTPGIHAR LKQACVGIAG AGGLGSAVAV ALARIGVGRL IIADFDLVEP SNLNRQQYFI DQIGLYKVAA LTQNLQRINP YISVEPHQAL LGPDNIPQLF APCSVVVEAF DRADMKAMLV DTVLSCLPGC CVVAASGVAG YDDNNSITTR RISSRLYLVG DGVSEAQPGN GLMAPRVAIA AGHQANQVVR IILGERS
|
| |