Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2728 |
Symbol | |
ID | 6368953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 2927626 |
End bp | 2928450 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642678143 |
Product | pseudouridine synthase |
Protein accession | YP_001952961 |
Protein GI | 189425784 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAGC GTCTGCAAAA AATCATATCC GCTGCCGGGA TCACCTCCCG CCGCGCTGCT GAAGAGATGA TCCTGGCCGG ACGGGTTACG GTCAACGGTC AGGTGGTAAC CGAGCTGGGC AGCAAGGCAG ACCCGGCCAA AGACCTGATC GCCCTGGACG GGCAGCCGGT CAAACCGGCT GAAACGTTCT ATTACGTGCT GCTGCACAAG CCGGCCGGCT ATGTCACCTC GCTGAAAGAC CCCCAGGGGA GACAGCTGGT AACCGAGCTG GTCAAGGATG TAGGCGAACG GCTCTTTCCG GTGGGACGGC TGGACTACAA CTCTGAAGGG CTGCTGTTGC TGACCAATGA CGGCGCCTGG GCCAACCGGC TGATGCATCC CCGTCACCAG GTGGACAAGG AATACCATGT GCGGGTACGG GGTAAGATTG ATCCACAGCA GATCAAGAAG TTGGCTGATG GGGTGGAGCT GGAGGATGGC CCCACCGGCG CCACGACGGT ACGCCTGCTG AAAAACGACC AGAGCAATGA CTGGCTCTCT GTTACCATCC GTGAAGGCCG CAACCGTCAG GTACGGCGGA TGTGCGCGGC AGTGGGGCTG TTTGTGGTAC GGCTGCGCCG TATCCGCTAC GGCAACCTGA CCCTGGGCGG CCTGCAGCCG GGTGAATACC GTCTCTTGAG CAGGGAAGAG GCGCAGGCGC TGGATGCCCC GCCACCGGTC AAACAACGGG AACAGCGAAT GGCAGCCCCT GTAAAATCAT CTACGACACC TCAGTCACAA ACGCCGGGCA AGCGGCCACC TCGCAGAAAA ATCATCGGGC AGTAG
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Protein sequence | MIERLQKIIS AAGITSRRAA EEMILAGRVT VNGQVVTELG SKADPAKDLI ALDGQPVKPA ETFYYVLLHK PAGYVTSLKD PQGRQLVTEL VKDVGERLFP VGRLDYNSEG LLLLTNDGAW ANRLMHPRHQ VDKEYHVRVR GKIDPQQIKK LADGVELEDG PTGATTVRLL KNDQSNDWLS VTIREGRNRQ VRRMCAAVGL FVVRLRRIRY GNLTLGGLQP GEYRLLSREE AQALDAPPPV KQREQRMAAP VKSSTTPQSQ TPGKRPPRRK IIGQ
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