| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2479 |
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| Symbol | |
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| ID | 6366497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2647758 |
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| End bp | 2649377 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642677895 |
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| Product | CRISPR-associated protein, Cse1 family |
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| Protein accession | YP_001952713 |
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| Protein GI | 189425536 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTTA TTAAAGATGC CTGGATACCG GTTATCCGGG CAAAAAGCGG CAGGGGGGTG
ATTGCCCCTT GGCAGATTGC GGAACTGGAC GACCCGGTTA TGGAGCTGGC CGCACCCAGA
CCGGATTTCC AGGGAGCTAT GTATCAGTTG CTGATAGGGC TGCTGCAAAC AGGATTTGCG
CCGGAAGATT TTGATGAATG GCTGGATTAC TGGAGCAAAC CACCGGATGC AACTTTGCTG
CGAACCAGGC TGGAAACGCT GGCAGCTGCC TTTGACTTTG ACAAGCCTGA TAGCCCCGCA
TTTATGCAGG ATTACGCGAT GCCTGATGGT GAGAAAAAGG GTATAGCCTC TTTGTTGATC
GAGTCTCCTG GCGGCAAGAC GGTCAAGGAT AACCTGGATC ACTTTATTAA ACGGGATGCA
GTGCAGCATA TGTGTAAGAG TTGTGCGGCC ATGGCGCTCT TCACACTCCA GACCAATGCG
CCATCGGGTG GCGTCGGGCA CCGGGTCGGT TTGCGTGGCG GTGGACCGTT GACAACCCTT
GTGCTGCCGC CGGAACAGAT GCCGCTATGG CAGACGCTCT GGCTGAATGT CCTTGATCGC
GAAGATATGC CGGAATATAG GCAAGATCGG GTCGCCGGGG TATTTCCCTG GATGGGGCCG
ACTCGTACCT CGGAGAAAAA TGGCGCGGAA ACTACACCGG AAAGCGTCCA TGCGCTTCAG
GCCTATTGGG GGATGCCGCG ACGGATTCGG CTGGACTTTC CCGCAAAGGC TAGCATGGGT
GATTGCGACG TGTGCGATGT CAAAAACGTC GCGCTGGTGG AGGAGTACCG GACGCGTAAT
TATGGTGTTA ATTATGTCGG TAACTGGGTG CATCCACTAA CACCTTACCG CTTTGATCCC
AAGAAAGAAA AACCGCCTCT GTCGCTGAAA GGGCAGCAGG GTGGGTTGGG ATACCGCTAT
TGGCTCGCCT TGACCCTTGC CAACGACACG GAAAATGGGG ACGCAGCTGC CAAGATCGTC
AGGCGCTACT CGGAACAACG TGCAACTGAA TTGAAAATCC AGCGGACTGC CAGACTTTGG
TGCTTCGGTT TCGACATGGA CAACATGAAG GCCCGTTGCT GGTATGACCA CACCTTTCCG
CTCTTTAATC TTGCTCCGCA ACAGCGCAAG AAGTTGCTGC AATGGGCTGA TGATCTGATT
ACCGTTGCCA ACGACGTCAG CAGTCTCCTG CGCAAACAGG TCAAGGCTGC ATGGTTCAGA
CGCCCTGAGG ATGCCAAGGG GGATATGAAC ACGGTTTCTC TGGATTTCTG GCAGCGGAGC
GAACCGGTTT TTTATGAACT GTTGGATCAA TTGGCAAAGG TATCGGGAGA GCAGGAGCTA
CCGCCGCCGG AGTTGTATTC ACAGTGGGAA AAAATGCTGG TGTCGCTATC TCTGCAACTC
TTCGATGCCT GGGTGCTGGA AGCGGCCAAT GAAGATATGG ATATGAAGCG AATTATTGCG
GAGCGTGATG GACTGAAACG ATTGGTGTAT GGCTGCAAGT CAATGAAAAC AATAAAAGCG
AGGGCATTAC CGGAAAAGGA GGGAACGGAT GGAACGAAAA CTGACGTATT ACTTTCTTAA
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| Protein sequence | MNLIKDAWIP VIRAKSGRGV IAPWQIAELD DPVMELAAPR PDFQGAMYQL LIGLLQTGFA
PEDFDEWLDY WSKPPDATLL RTRLETLAAA FDFDKPDSPA FMQDYAMPDG EKKGIASLLI
ESPGGKTVKD NLDHFIKRDA VQHMCKSCAA MALFTLQTNA PSGGVGHRVG LRGGGPLTTL
VLPPEQMPLW QTLWLNVLDR EDMPEYRQDR VAGVFPWMGP TRTSEKNGAE TTPESVHALQ
AYWGMPRRIR LDFPAKASMG DCDVCDVKNV ALVEEYRTRN YGVNYVGNWV HPLTPYRFDP
KKEKPPLSLK GQQGGLGYRY WLALTLANDT ENGDAAAKIV RRYSEQRATE LKIQRTARLW
CFGFDMDNMK ARCWYDHTFP LFNLAPQQRK KLLQWADDLI TVANDVSSLL RKQVKAAWFR
RPEDAKGDMN TVSLDFWQRS EPVFYELLDQ LAKVSGEQEL PPPELYSQWE KMLVSLSLQL
FDAWVLEAAN EDMDMKRIIA ERDGLKRLVY GCKSMKTIKA RALPEKEGTD GTKTDVLLS
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