Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2441 |
Symbol | |
ID | 6367546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 2610383 |
End bp | 2612059 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642677857 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001952675 |
Protein GI | 189425498 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00204105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGTTG ACGACAAAAA AGTTATCTAT AGTATGATGC GGGTATCGAA GTTCTACGAC AAGAAACCGA TTATCAAGGA CATTTCCCTG TCCTACTTCT ATGGCGCCAA GATCGGTGTG CTGGGCCTGA ACGGCTCCGG TAAATCGACC CTGCTGAAGA TCATGGCCGG GGTGGACACC GAGTTTAACG GTCAGGTGGC GTTGTCACCC GGTTATACCG TAGGGTATCT GGAACAGGAG CCAAAGCTGG ACGAGAACAA GACCGTCCGG CAGGTGGTTG AGGAAGGCTG CCAGGAGATC GTTGACCTGT TGGCCGAGTT CAACGGCATT ACCGACAAGT TTTCCGAACC GGATGCCGAT TTTGAAAAGC TGTGCGACCG CCAGGCGGTG CTGCAGGAAA AGCTGGACCA TCTGGATGCC TGGGATCTGG ACTCCCGTCT TGAGCTGGCC ATGGATGCCC TGCGCTGCCC CGATGGCGAC ACGCCGGTCA AGGTGCTTTC CGGCGGTGAA AGAAGACGGG TGGCCCTCTG CCGCCTGCTG CTGAAAAAGC CGGACATCCT GCTGCTGGAC GAACCGACCA ACCACCTGGA TGCCGAGACC GTGGCCTGGC TGGAAAAACA CCTGCACAGC TACAGCGGCA CCGTGATCGC CGTTACCCAC GACCGTTATT TCCTGGATAA CGTGGCCGGC TGGATTCTGG AGCTGGACCG CGGCGAAGGG ATCCCCTGGA AAGGCAATTA CTCCTCCTGG CTGGAGCAGA AACAGGGACG TCTGGCGGTT GAGGAGAAGC AGGAGAGCGA ACGTCAGAAG ACCCTGAAAC GCGAGCTGGA ATGGATCAGG ATGTCGCCCA AGGGCCGTCA CACCAAGGCC CAGGCACGGA TCAGCAAATA CGAGGATCTG GCAGCCCAGG AAGGTGAGGC ACGGGGCAAG GATCTGGAAC TGTACATCCC GGCCGGCCCG CGGCTGGGGG ATATCGTGAT CGAGGCGGAC AATGTCAGCA AAGGTTTCGG TGACCGGCTG CTGTACGAAG GGATGACCTT CAAGCTGCCC CGCGGCGGGA TCGTTGGCGT AATCGGCCCC AACGGTGCCG GTAAGACCAC CCTCTTCCGG ATGATCACCG GTACGGAGAC GCCGGACAGC GGCACCATCA GGATCGGTGA CACGGTCCAG GTTGCCTATG TGGACCAGAG CCGTGACAGC CTCAACCCGG ACCGCCTGTT ATGGGAAGAG ATCAGCGACG GGCAGGAGAT GATCCAGCTG GGCAGGCAGA CCGTCAATGC CCGCAACTAT GTGGCCCGCT TTAACTTTAC CGGCGGCGAC CAGCAGAAAA AGGTGGGGAT GCTGTCCGGC GGCGAACGCA ACCGGGTCCA CCTGGCCAAG GTGCTGAAGA GCGGCGCCAA CGTGCTGCTT CTGGACGAAC CGACCAACGA CCTGGATGTC AACACCATGC GGGCCCTGGA GGAAGGGCTG GAAAACTTCG GCGGCTGCGC CGTGGTTATC TCCCACGACC GCTGGTTCCT GGACCGGATC GCCACCCATA TCCTTGCCTT TGAAGGGGAT TCAAAGGTAA CCTGGTTTGA AGGCAACTAC TCCGAATATG AGGAGGACCG CCGCAAACGC CTTGGCAGCG AAGCGGACCG CCCGCACCGG ATCACCTATC GCAAACTGAC CCGCTAA
|
Protein sequence | MSVDDKKVIY SMMRVSKFYD KKPIIKDISL SYFYGAKIGV LGLNGSGKST LLKIMAGVDT EFNGQVALSP GYTVGYLEQE PKLDENKTVR QVVEEGCQEI VDLLAEFNGI TDKFSEPDAD FEKLCDRQAV LQEKLDHLDA WDLDSRLELA MDALRCPDGD TPVKVLSGGE RRRVALCRLL LKKPDILLLD EPTNHLDAET VAWLEKHLHS YSGTVIAVTH DRYFLDNVAG WILELDRGEG IPWKGNYSSW LEQKQGRLAV EEKQESERQK TLKRELEWIR MSPKGRHTKA QARISKYEDL AAQEGEARGK DLELYIPAGP RLGDIVIEAD NVSKGFGDRL LYEGMTFKLP RGGIVGVIGP NGAGKTTLFR MITGTETPDS GTIRIGDTVQ VAYVDQSRDS LNPDRLLWEE ISDGQEMIQL GRQTVNARNY VARFNFTGGD QQKKVGMLSG GERNRVHLAK VLKSGANVLL LDEPTNDLDV NTMRALEEGL ENFGGCAVVI SHDRWFLDRI ATHILAFEGD SKVTWFEGNY SEYEEDRRKR LGSEADRPHR ITYRKLTR
|
| |