Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_2105 |
Symbol | |
ID | 6367377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 2244627 |
End bp | 2245265 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642677518 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_001952341 |
Protein GI | 189425164 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0670803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACTA ACATGAGCCG ACTTGTCGAC CATATCTGTG ACAGAGATAT GTGCTGTCCC TGCATTTTGT CTCTGCTGGG CCTGTTGTTT CTGTCTGTCA CACTCTTCCC TGCCCCTTCC TGTGCAGACA TTTATCGCTA TGAAGATGAA GAAGGGGTGG TGCATTTTAC CGATGCACCG ACTGACAAAA AATTCAAGAT TTTCATGCGC GATCTGCGCA AGGATCGTCA ATTGCGGACC CGTTTTCGCA TCGCCTACGG TAATCCGCAG GAATTTGAGC ACCTGATTGC ATCTGCTTCA GCCAAGTACG GTGTCAGTGC CTCGCTGATC AGGGCGGTTA TTCAGGCCGA ATCAGGGTAC AACCCCCAGG CGGTTTCCCG GGCCGGTGCC GGTGGCTTGA TGCAGTTGAT GCCCGGTACC GCAAAACACC TGAAGGTTGC TGACCGCTTT GATCCTCACC AGAATGTTGA CGGCGGTGTT CGGTACCTGA AATTCTTGCT TGATACCTTT AAAGGTGATG TTTCACTGGC CCTTGCCGCC TACAATGCAG GACTTTCCAA AGTTGCCAAA TACGGCGGTA TTCCACCCTA CGAAGAGACC CGAACCTATG TCAGCAGGGT TCTGTCATAC ATGAGATAA
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Protein sequence | MLTNMSRLVD HICDRDMCCP CILSLLGLLF LSVTLFPAPS CADIYRYEDE EGVVHFTDAP TDKKFKIFMR DLRKDRQLRT RFRIAYGNPQ EFEHLIASAS AKYGVSASLI RAVIQAESGY NPQAVSRAGA GGLMQLMPGT AKHLKVADRF DPHQNVDGGV RYLKFLLDTF KGDVSLALAA YNAGLSKVAK YGGIPPYEET RTYVSRVLSY MR
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