Gene Glov_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_2105 
Symbol 
ID6367377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp2244627 
End bp2245265 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID642677518 
ProductLytic transglycosylase catalytic 
Protein accessionYP_001952341 
Protein GI189425164 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0670803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACTA ACATGAGCCG ACTTGTCGAC CATATCTGTG ACAGAGATAT GTGCTGTCCC 
TGCATTTTGT CTCTGCTGGG CCTGTTGTTT CTGTCTGTCA CACTCTTCCC TGCCCCTTCC
TGTGCAGACA TTTATCGCTA TGAAGATGAA GAAGGGGTGG TGCATTTTAC CGATGCACCG
ACTGACAAAA AATTCAAGAT TTTCATGCGC GATCTGCGCA AGGATCGTCA ATTGCGGACC
CGTTTTCGCA TCGCCTACGG TAATCCGCAG GAATTTGAGC ACCTGATTGC ATCTGCTTCA
GCCAAGTACG GTGTCAGTGC CTCGCTGATC AGGGCGGTTA TTCAGGCCGA ATCAGGGTAC
AACCCCCAGG CGGTTTCCCG GGCCGGTGCC GGTGGCTTGA TGCAGTTGAT GCCCGGTACC
GCAAAACACC TGAAGGTTGC TGACCGCTTT GATCCTCACC AGAATGTTGA CGGCGGTGTT
CGGTACCTGA AATTCTTGCT TGATACCTTT AAAGGTGATG TTTCACTGGC CCTTGCCGCC
TACAATGCAG GACTTTCCAA AGTTGCCAAA TACGGCGGTA TTCCACCCTA CGAAGAGACC
CGAACCTATG TCAGCAGGGT TCTGTCATAC ATGAGATAA
 
Protein sequence
MLTNMSRLVD HICDRDMCCP CILSLLGLLF LSVTLFPAPS CADIYRYEDE EGVVHFTDAP 
TDKKFKIFMR DLRKDRQLRT RFRIAYGNPQ EFEHLIASAS AKYGVSASLI RAVIQAESGY
NPQAVSRAGA GGLMQLMPGT AKHLKVADRF DPHQNVDGGV RYLKFLLDTF KGDVSLALAA
YNAGLSKVAK YGGIPPYEET RTYVSRVLSY MR