| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2015 |
|---|
| Symbol | |
|---|
| ID | 6368032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 2144442 |
|---|
| End bp | 2145431 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642677427 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001952251 |
|---|
| Protein GI | 189425074 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.471661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCT CTATCCTGGC AGCAGATAGG GTGAGCAAGA GTTTTGATCT GAAAGGATCA
GGGCTTAGCG CGGGGAATAA ACTACGGCTC AAGGCGGTGG ATACCGTTTC TCTGAACCTT
ACAGCCGGAG AAACCCTTGG CATAGCCGGG GAATCCGGCT GTGGCAAGTC AACCCTTGCC
AAACTGATCA CCGGGCTGTT GCAACCGGAT AGTGGCGTGG TCAGCTTTCA GGGCAACGAT
ATCAGACAGC TTGCTGCGCC GGATACCCGG CAGTTCCGTC GTTCTGTCCA GATGGTATTT
CAGGACCCGT TCTCATCCCT GAACCCCCGT ATGCGGATCG GTGATACCAT TGCTGAACCG
CTCCTGATCC ATAAGCTGTG CGATGTGGAC CGTATCCGCG AAACCAGCGT CAACCTGATG
GAGCAGGTTG GCCTGTCCGG TGACCAGTAC GACCGTTTCC CCCACGAATT TTCAGGGGGT
CAGCGTCAAA GGATCGGCAT TGCCCGTGCA CTGGCTGCCA GACCTGCCGT GCTGATTGCC
GACGAACCGG TATCGTCACT TGATATTTCC ATCCAGGCCC AGATCATCAA TCTGTTGCAG
GATCTTAAAC AGCAACATGG TCTGAGCCTG CTGATGGTCA GCCATGATCT CGGCGTGCTG
CGCCATATCT GTGACCGGAT AGCGGTTATG TATCTGGGGG CTGTGGTTGA GCTGGCACCG
GCCAGTGAGC TGTTTACCCA TTGCCGTCAT CCCTACAGCC AGGCCCTGCT GGCTGCAATC
CCCAGCATTC ACAAGAACTC CGGAATATCC TGCCGGCCAT TGCGTTCCCA TGACGTACCG
TCTGCTGCCA ATCTGCCGGA GGGGTGCCGT TTCCACCCCC GTTGTCCCTA TGCTGAAGAG
ATCTGCAGAA AGGAAAGCCC CATGTTGCAG GAGCAGCGTC CAGGACACCT TGCAGCCTGT
CATCTCAGCG ACAGGATATT CACAGAGTAG
|
|---|
| Protein sequence | MSRSILAADR VSKSFDLKGS GLSAGNKLRL KAVDTVSLNL TAGETLGIAG ESGCGKSTLA
KLITGLLQPD SGVVSFQGND IRQLAAPDTR QFRRSVQMVF QDPFSSLNPR MRIGDTIAEP
LLIHKLCDVD RIRETSVNLM EQVGLSGDQY DRFPHEFSGG QRQRIGIARA LAARPAVLIA
DEPVSSLDIS IQAQIINLLQ DLKQQHGLSL LMVSHDLGVL RHICDRIAVM YLGAVVELAP
ASELFTHCRH PYSQALLAAI PSIHKNSGIS CRPLRSHDVP SAANLPEGCR FHPRCPYAEE
ICRKESPMLQ EQRPGHLAAC HLSDRIFTE
|
|---|
| |