| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1892 |
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| Symbol | |
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| ID | 6367220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2014285 |
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| End bp | 2016600 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642677298 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001952128 |
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| Protein GI | 189424951 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGCT ACCGCCTCTC CATAAAGCTC AAGCTGCTGC TGGCGATCTT GCCGATCCTG
GCAGCGCTTG GCTTTCTGAC CACTATTTTT GTGTCGTCGT ACATCCAGCA TTCATTTCAG
CATGATCTTG AAAAGCAGCA ACTGACCCTT GTCTCGCTGA TGGCACAAAA GCTGGATGAC
CAGTTTGCCG CCTACCAGAA AACCATCATC TCATTTTCAA AAAGCATCCC GCGTCATGCC
TTGAACAATC CGCAACAGCT GGAACAGTAC ATTGACAGCC GGCAAGGTGT TCTGGAATTT
TTTGATAACA ATGTGGTGGT TTTCTCTCCT CAAGGGGTGT TGCTGGCTGA GACAGCCAAA
CGCCCAAGCC GCACAGGTAC TGATTTTTCC TTCCGCGATT ATATCATCCA GACCCGTAAA
AACTGGCTGC CTGTCATCTC CAAGCCGTTT CGGAGCCAGC TCAATCACCG GCCACCGGTT
GTGATGTTCA CTGCGCCGGT GCTTGACAAG GATGGCACGC CCCTGGCGAT TGTGGGGGGG
AGCATCAACC TGCTGCGTCC CAATCTACTG GGCAGGCTGG CCACTACCAG GATCGGCAGC
AACGGCTATT TTTATCTGAG CGATCTTGAT CGCACCATGA TCATGCATCC GGATCAGAAT
CGTCTGATGA AGCCGGTTGC TGCACCCGGG GTTAACAGGC TGTATGACAG GGCGCTGGCC
GGTTTTGAAG GGGCAGGGGA GACCAGTAAT AGCGAGGGCG TAGCAATGTT GACCGCATTC
AAGCGCCTCA GCACGGTTAA CTGGATCATG GCGGTCCAGG TGCCTGTTAA AGAGGCCTAT
GCCGCTGTCA ACACTGCCCG ACGTCTGGCA TGGATCAGCA CCGGCTGCGC CCTGCTTGTG
CTTGCCATAC TTACCATTGC AGCTGCCTCG CATCTGCTGG CGCCACTGCA GCTGCTGACG
ACCCGGGTGT CACAGGTTGA CCAGGACAGC GAGTACCAGC CGATCAAGAT TGCGTCCAAT
GATGAAATCA GCGAACTGGC CACGGCCTTT AACAGCCTGA TGTATCAACT GCAAGCCCGC
GAACGTGATC TGCGCAGTAG CCGGGAGTTG TTCCAGTTTA TTGCAGACTT CTCCCATGAT
TGGATCTTCT GGCGAATACC GGGCGGGGCA ATGCTGTATA TCTCACCTGC TGCGGAGGAG
ATCACCGGAT ACTCGGTTGA TGAGCTGATG TCCGAGCCTA CCCTGACCTA TACCATGATC
CACCCGGAAG ATCGCGGCCT CTGGGATCAG CATCTCTGTC AGACCGAAAA AAGTCCTGAT
AATCAGACTA TTGAGTACCG GATCATCACC AAATCGGGTC AGGTGCGCTG GTTACGCCAT
ATCTGTGTTT CAATCTTTGA CGACAATGGC GCATTGCTGG GAGTACGGGG GAGTAACCGC
GATATCACTG AACGCAAGCT TGCGCTGCTG ACGTTGAAGG AGAACGAAGA ACGCTTCCGC
TTGATCGCCA AAACAGCCCA CGATGCGATC ATCATGACTG ATCTCCATCA TCGCATCAGC
TTCTGGAATC CGGCAGCAGA ACTGCTTTTC GGGGCCGACT CGGCCGCTGT TATCGGCCTG
CCGCTGGTAA CCTTCCTGCC CGGCCTGGTG GATGCGGTGC ATCAGTCCGA GACGAATAGT
GAGCGGGGGC TGATGCTTGA AATCAGCGGA CGTCATCAGG ATGGCCATCT GCTAATGGTG
GAGCTGGCCT ATTCGCAGGC CCGGCTTTCA GGTGCCCCGG TCACGGTGGT GGTTGCCCGT
GATATTACGG CACGCAAACA GACAGAAGAA CAACTGCGCT ATATCAGCCT GCATGACAGT
CTGACCGGAC TCTATAACCG GGCCGCCTTT GAACACCACC TGTCCCGTTT TGACAAGGAA
GGGCCGTTCC CGTTGGCAGT GATCATGGCT GACCTGGATG GTCTCAAGCA GGTCAATGAC
ACCCAGGGAC ATGAGGCCGG TGACCGTTTG CTGCAGGCTG CAGCCGAACT GCTCTCACTC
TCGTTTCGTA CCAATGATAT TGTTGCCCGG ATCGGCGGAG ATGAATTTGC CCTGCTGTTG
CCGGGTATCC CGGAAGAGAT GGCAAAGAAC AAGTTTAACC GCCTGCAGCG GCAGATTGAA
CTGTTTACGG AATTACCTGA AAATCCGCAG GTTGCGCTAT CCTGCGGCAT GATCCAGGTC
ACCGGGCCGG GGCAACTGCT GGAGGCGGTG AAACAGGCCG ATCAGCTGAT GTATCAGCAG
AAAAAGGCCC GTAAAGAAAA TTTATCCCTG CTTTAA
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| Protein sequence | MSRYRLSIKL KLLLAILPIL AALGFLTTIF VSSYIQHSFQ HDLEKQQLTL VSLMAQKLDD
QFAAYQKTII SFSKSIPRHA LNNPQQLEQY IDSRQGVLEF FDNNVVVFSP QGVLLAETAK
RPSRTGTDFS FRDYIIQTRK NWLPVISKPF RSQLNHRPPV VMFTAPVLDK DGTPLAIVGG
SINLLRPNLL GRLATTRIGS NGYFYLSDLD RTMIMHPDQN RLMKPVAAPG VNRLYDRALA
GFEGAGETSN SEGVAMLTAF KRLSTVNWIM AVQVPVKEAY AAVNTARRLA WISTGCALLV
LAILTIAAAS HLLAPLQLLT TRVSQVDQDS EYQPIKIASN DEISELATAF NSLMYQLQAR
ERDLRSSREL FQFIADFSHD WIFWRIPGGA MLYISPAAEE ITGYSVDELM SEPTLTYTMI
HPEDRGLWDQ HLCQTEKSPD NQTIEYRIIT KSGQVRWLRH ICVSIFDDNG ALLGVRGSNR
DITERKLALL TLKENEERFR LIAKTAHDAI IMTDLHHRIS FWNPAAELLF GADSAAVIGL
PLVTFLPGLV DAVHQSETNS ERGLMLEISG RHQDGHLLMV ELAYSQARLS GAPVTVVVAR
DITARKQTEE QLRYISLHDS LTGLYNRAAF EHHLSRFDKE GPFPLAVIMA DLDGLKQVND
TQGHEAGDRL LQAAAELLSL SFRTNDIVAR IGGDEFALLL PGIPEEMAKN KFNRLQRQIE
LFTELPENPQ VALSCGMIQV TGPGQLLEAV KQADQLMYQQ KKARKENLSL L
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