| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1822 |
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| Symbol | |
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| ID | 6368955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1942399 |
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| End bp | 1943781 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642677227 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001952058 |
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| Protein GI | 189424881 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00945671 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAT CAACAGCAAC ACAGGGGCTT ATGACACCGA AAAAGGCAGC CATCTGGGTT
GTCGCTATCA TTCTGTCATT GTTTGCCATT GCGTCATTTG GTAATGCCGG GATTGTCTTT
GCCCTGCTGA TCGGCCTGAT GCTGACCGGC ATGCCGATCT CCATCTCACT GGGCCTGACC
GTGCTGACCT TCCTGTTTTT CATGTCTCAG GTACCGGTTG AGACCGTGGC CATGAAGCTG
TTTACCGGCA TTGAGAAATT CGAGATCATG GCGATTCCGT TCTTTATCCT GGCCGGTAAC
TTCCTGACCC ACGGCGGGGT TGCCAAGCGG ATGATCAACT TTGCCACTGC CATGGTGGGG
CACTGGCACG GCGGTCTGGG TCTGGCCGGG GTCATGGCTT GCGCCCTGTT TGCCGCAGTG
TCCGGTTCCA GTCCGGCAAC CGTGGTGGCC ATCGGCTCAA TCCTGCTGCC GGCCATGGTC
AAGGCAGGAT TCCCCAAGAA CTTCGGGGCC GGGGTCATCT CCACCTCCGG CTCGCTGGGA
ATCCTGATTC CCCCCTCCAT TGTAATGGTG ATCTATGCCG TGGCCACCAA CTCCTCAGTT
GGCGCCCTGT TCATGGCCGG TATCATCCCC GGCCTGATGC TGGCCACCCT GCTGGGCTCG
GTGGCCTGGT ACCGGGCACG CAAGTTCAAC TACCCCCGCA TGCCCAAGGC AACCATGAAG
GAGCGGCTCA AGGCCTTTAA GGAGAGCATC TGGGGCCTGC TGCTGATTGT AATCGTGCTG
GGCGGTATCT ACTCCGGTAT GTTTACCCCC ACCGAGGCAG CTGCCATGTC TGCGGTCTAT
GCCTTCTTTG TGGCGGTGTT TGTCTACAAG GATATGACCT TCAAGGGAAT TCCCAAGGTG
CTGCTTGATT CGGCCAACAT GTCGGCCATG CTGCTCTACA TCATCACCAA CGCGGTGCTG
TTCTCCTACC TGATGACCTC GGAGCAGATC CCGCAGATCA TGGCTGACTG GATGATTGCC
CACAACTTCG GCGTCATCGC TTTCCTGGCC GTGACCAACG TACTGCTGCT GCTGGCCGGT
AACGTGATGG AGCCGTCCTC GATCATCCTG ATCCTGGCGC CGATCCTGTT CCCGGTGGCC
ATGAAACTGG GGATTGACCC GATCCATTTC GGTATCCTGA TCACCGTCAA CATGGAAGTG
GGTATGTGCC ACCCGCCGGT CGGTCTGAAC CTGTATGTAG CCAGCGGCAT CACCAAGATG
GGGATCACCG AGCTGACCGT GGCAGTGCTG CCCTGGCTGA TCGCCATGGT GGGTTTCATG
CTGCTGGTGA CCTATGTGCC TGAGATCTCT CTCTGGCTAC CCAGACTGAT GGGCTATTTA
TAA
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| Protein sequence | MSASTATQGL MTPKKAAIWV VAIILSLFAI ASFGNAGIVF ALLIGLMLTG MPISISLGLT
VLTFLFFMSQ VPVETVAMKL FTGIEKFEIM AIPFFILAGN FLTHGGVAKR MINFATAMVG
HWHGGLGLAG VMACALFAAV SGSSPATVVA IGSILLPAMV KAGFPKNFGA GVISTSGSLG
ILIPPSIVMV IYAVATNSSV GALFMAGIIP GLMLATLLGS VAWYRARKFN YPRMPKATMK
ERLKAFKESI WGLLLIVIVL GGIYSGMFTP TEAAAMSAVY AFFVAVFVYK DMTFKGIPKV
LLDSANMSAM LLYIITNAVL FSYLMTSEQI PQIMADWMIA HNFGVIAFLA VTNVLLLLAG
NVMEPSSIIL ILAPILFPVA MKLGIDPIHF GILITVNMEV GMCHPPVGLN LYVASGITKM
GITELTVAVL PWLIAMVGFM LLVTYVPEIS LWLPRLMGYL
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