| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1760 |
|---|
| Symbol | |
|---|
| ID | 6368860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 1873776 |
|---|
| End bp | 1875197 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642677165 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001951996 |
|---|
| Protein GI | 189424819 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.554911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAA CCCATTTGAT GGATGAAATA CTGATCGTCG AAGATGATCG CTTTTTCCGG
GAGCTCTATG CCGACCTCCT GAGGCAGGCG GGCTATAGTG TCACCACAGC CTGTTCCGGT
GAAGAGGCGA CCGAGCAGCT GGCTTGTTCC CGCTTCGGCC TGGTGGTGAC AGACCTGACC
ATGCCCGGCA TTTCCGGTTT GGAACTGTTG GTCAAGATAA AGTCTCAAGA TCCCTCGATT
GATGTTATTC TGGTAACTGC CAACGCCGAT CTGGAGTCAG CTCTTTTTTC TCTCAAGCAT
GGTGCTCGAG ATTTTTTATT AAAGCCGATC AATTCCGATG AGCTCTTGCA TGCCGTACGA
CTCTGCATGG AACAACGTCG TCTGCTTGAT GAGAACGTCG AGTTGCGCAA CATGCTGGGC
CTCCTGCAGA CCAGCCAGAC CCTGTCCAGT TGTCTGGACC TGGAGGGGGT CTGTCACCTC
GCGGTTGATG CGCTGGCCCG TGAGGCCGGT GTGAGTCGCG GCATTGGTAT GGTGCAGTTG
GAAGGTGAGT TTGTTATCAA AGAACTCAAA GGGCTCGATG CTGCAACCGG TTCATTACTG
GACAGGCTGC TGGCCTCTTC CTATCGCAAA CGGGTTTCCC GTAAAGGGCA GCCGATCCGG
ATATTGCTGC CGGCAGGGCA CGAAGAGCTT GATCAAGCCG ACCTCAGGGA GGCAATTCTT
TTCCCTCTCA CCATCAGAAG CAGCTGTCCC GGCATGGTGA TCCTCCTGAA TGATCCCAAC
CAGATAGTGC CACCCATCAA GAATGAGCGT AATATCAACT TTCTTGAAGA GCATGCTGCC
AGAGCCCTGG ACAATGCCCT GCGTTTCACC TCAACCAGAG ATCTGCTTTA TATCGATGAG
TTGTCCGGTC TGTTCAACTA CCGCTACCTG AAGGTTGCCC TGGAACGTGA AATAAAGCGG
GCTGACCGCT ACTCCACTCA GTTGTCGGTA GTGTTTCTTG ATCTGGATAA TTTTAAAGGG
GTGAACGATA CCTATGGTCA TCTGGTGGGC AGTAACCTGC TCAAGGAGCT GGGAGCACTC
CTGAAAAAGT CGGTCCGTGA GGTTGATGTG GTGATCCGCT ACGGCGGCGA TGAGTATACT
ATTATACTGG TGGAAACCGG GGCTGAAACG GCTCATTGTG TCGGTGAGCG TATCCGGCGG
ATGATTGAAA AACACAGCTT TCTTTCCCTG GAGGGCTATC AGATTCAATT GACTGCCAGT
CTGGGACTGG CCTGTTACCC GGAAGACACC ACGGGACTTG AGGAACTGCT TTCAATGGCC
GACAAGGCTA TGTATGCCGG CAAGGCCTCG GGAAAAAACT GTGTTTACCG CATTGTCAGC
CCGCTGGCTG GCGGTGGAGT ACTGCATAAG GAGCAACGAT GA
|
|---|
| Protein sequence | MPTTHLMDEI LIVEDDRFFR ELYADLLRQA GYSVTTACSG EEATEQLACS RFGLVVTDLT
MPGISGLELL VKIKSQDPSI DVILVTANAD LESALFSLKH GARDFLLKPI NSDELLHAVR
LCMEQRRLLD ENVELRNMLG LLQTSQTLSS CLDLEGVCHL AVDALAREAG VSRGIGMVQL
EGEFVIKELK GLDAATGSLL DRLLASSYRK RVSRKGQPIR ILLPAGHEEL DQADLREAIL
FPLTIRSSCP GMVILLNDPN QIVPPIKNER NINFLEEHAA RALDNALRFT STRDLLYIDE
LSGLFNYRYL KVALEREIKR ADRYSTQLSV VFLDLDNFKG VNDTYGHLVG SNLLKELGAL
LKKSVREVDV VIRYGGDEYT IILVETGAET AHCVGERIRR MIEKHSFLSL EGYQIQLTAS
LGLACYPEDT TGLEELLSMA DKAMYAGKAS GKNCVYRIVS PLAGGGVLHK EQR
|
|---|
| |