Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1623 |
Symbol | |
ID | 6368364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1727106 |
End bp | 1727804 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642677027 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_001951859 |
Protein GI | 189424682 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000375126 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTC CACTGCGCCT CATACTGCTG ACTCTGGTGC TTATGGCAAT GGCTGGCTGT GGTGGTCATG ACCCGATTTG GCGTATGAAG GCGCAGTTGA CCTTACTGCA ATTGCAGGAT GAAAACGCTT CTAATTCTTA TCCGGATGAT TATACGAGTA TCAGCAAAAC CTTTCTATTT GGTGAGCTCC TGCTGACCGA AGAGGATGAG GCGGAGTTGG CTGACGAGCA GTATAAGCTG GCGTATCAAA AGGGGCTACT CCTGAAGCAA GAACTCAGGC AGTATAAAGA GAGGCTTAAA GAGGAAGCTC GTTTAAAGTT GATAGAAGAA CAGGCTGTTC GTGAAGAGGA AGAACGGGCA AGGTTGGAGG CAGAACGCAA GAGGGAACAG GAGTTGGCCG AGGCACAGAG CGCCTTGCAA CGCAAGAAGG ACGGTGATAC CGTTACAGGT GAGGGGGCTA ACCATGTCAC ACAACTTACC TCGTACACGG TAAAACGTGG TGAAACCCTG CCCCAGATTG CCGCCCGGCC CGAACTCTAT AATGATGCAG CGCTTTGGCC ATTGATTTAT CGAGCCAACC GGGATCAGAT CCGGGATCCT TACCAGCTCT GGCCAGGGCA GGTTTTGAAA GTCCCTCGTA ATTTTAGCAG AGACGAAGCT CTGGAGGCTC GTCGGCAAGC CCATCGCCGT GGTCAGTAA
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Protein sequence | MKAPLRLILL TLVLMAMAGC GGHDPIWRMK AQLTLLQLQD ENASNSYPDD YTSISKTFLF GELLLTEEDE AELADEQYKL AYQKGLLLKQ ELRQYKERLK EEARLKLIEE QAVREEEERA RLEAERKREQ ELAEAQSALQ RKKDGDTVTG EGANHVTQLT SYTVKRGETL PQIAARPELY NDAALWPLIY RANRDQIRDP YQLWPGQVLK VPRNFSRDEA LEARRQAHRR GQ
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