| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1602 |
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| Symbol | |
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| ID | 6368274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1694075 |
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| End bp | 1696492 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642677000 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001951838 |
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| Protein GI | 189424661 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00432386 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCG TACCTTCTCA GGAACAATCT TCTCAGCCCA GCTCAGCCTG GTTTGATTCA
CTGTCAAGGC TGATTCAGCC GGATGCACGG AATCGCTCCA TTGGAGAACG GCTGGTGGAG
CAGTGTGTCA GGGTATCATT AATGGTCAAA CTGCGCTGGG CCATGCTGGC GGCATTATTC
TGTTACGTGC TGCTGGCAGA ACTGTTCCTG GCGCCGGACA TTGACCTGCC GATCTTCCAT
ATTGAACAAT GGAGCCTTTC GCTCAAGGCT ACGGCAATCT TCTTTGCCGT TGCCTTCCCA
CTGGTATCGC TCCCCTGCAG CGTCTGGAGA AACTGTCGCT TGGTGATCTA TCTGCAGGTG
CTGCTTGATC TCTTGTTTGT GACGGCTGCA ATACACTGGA GCGGAGGTGT TGTCAGTTGG
CTTTGGCCGG CTTACCTGCT GATTTCGCTG GAGTCTGCCT TCCTGTTTGA GAAGAAGCGG
GAGGTCTGGG GTATCGGCAT GATCGGCGCA GCACTTTATG GGGTGCTGCT TGCGGCTGAA
CAACTTGATT TTATCGCAAC GGTCAGAATG CCGTTTATGG AGGAGGAAAG TCCCAGTATC
CTGTTTGAGC TGTTGATGTG GCTCTGGGTT GCCGGGGTTA ATACGGTGGT TTCATTCTTT
GGTGCCTTTC TGATGGATAA AATCCGCTCA GATCATCAGA AGGTCCAGCA AAGTCAAGAG
GCCTTGACCG GCTTTATTGC CACAGCCCAC GATCTGATTT TCTGCTGCCG TCAGGATGGG
ACCCTGCTGT ATCTGAATCA GGTCGGGCAG GATATGATCG GACCACTGGA AGGGGAGGGC
GGTGATATCA GTCTGTTCAA CCTGACTGAT GAGGAAGGTA AGGGGCTGTT GGCACGCCAG
TTTGAAAAAG TGACACGACG GATAGATGCC GGTCATTTCG AAATGCGCCT GCTTTCTCCA
GCCGTTGGCA GGATACTGGA TCTGGAGGTG AGCCTCTCCA CCTGCTGTAA TGACGTGCCG
GATCAGGTGA TCTGGGGGGT CTGCCACGAT ATTACGGAAC GTAATCTGGC CCAGCGTGAA
CTGATCAAGT TGGCCCATCA CGACGTGCTG ACTGGCTTGC CCAACCGGAT ACTGCTGCAT
GATCGTCTGC AGCAGGCCCG TGCCTTTGCC CACCGGATGA ACTCCCGCTT TGCGCTGCTG
TTTCTTGATA TGGACCGCTT CAAGATTATC AACGATACAC TGGGCCATGC GGTGGGGGAT
GACCTGCTCA GGATGATTGC CCAGCGTCTG AAGGCCTGTT TTCGTGAGAC CGATACCGTT
GCCAGAATCG GTGGTGATGA ATTTGTTGTG CTGATGCTGA ATGTTACTGA TCGAACCGAT
ATCTGTACTT TGAATGACAA GCTGCTCCAG GAGCTCGCCC AGCCGTTTAT GATCCGTGGC
CATGAACTGT TTGTAACCAC CAGCGGCGGT GTCTGTACCT ATCCCGATGA TGAGGATGAT
GTCGAGATCA TGATGCAGAA GGCGGATATT GCCATGTACC ATGCCAAGGC GCTGGGACGG
AACAATATCC AGTTCTATAA TGACGGCATG GATCAGAACT CGTCCCGCCG CTTTACCATT
GCCAACTCCA TGCGGCGTGG CCTGGATCGT GGAGAGTTCC GGCTCTATTA CCAACCCAAG
CTGGATGTCT CAAGCGACTG CATTGTTGCC ACTGAAGCAC TGGTGCGCTG GCAGCATCCC
GAGCTTGGCC TGCTGGCCCC GACAGAGTTT ATTCAGCTGG CCGAGGAAAG TGGTTTGATT
GTCGAACTTG GTGAATGGGT GCTACGGGAG GCCTGTCGCC AAAACATGGT CTGGCGGCAG
GAAGGGATGC GCGGTCTGCG GGTGGCGGTT AATCTCTCCG GCTATCAGTT GCAACACAGT
CGCCTGGTGG AAACGGTCCG CAAGGTCCTT GATGAGACAG GTATGCCGGG CGAACTGCTT
GAGTTTGAGA TCACCGAGAG CGTGATCATG CAGAACCCTG ACTATGCGGT GGAGGTGCTG
AATGAGATCA CCAACCTCGG CATTCATATC TCGATTGATG ATTTTGGTAC CGGCTATTCA
TCCCTTGCGC ACCTGAAACG CTTCAGCGTG AATACCTTGA AAATAGACAA GTCATTTGTG
CGCGACGTGG AGAACAACAC CACCGACGCG GCAATTGCCT CTGCCATTAT TGCCATGGGA
AGCAGTCTGA ACCTGAAGGT GATTGCTGAA GGGGTTGAGA CAGAACAACA GATGGACTTC
TTGAGGGATA ATAACTGCGA TCAGGTTCAG GGCTTTCTGA TCAGTCGTCC GCTCCCTGCC
GATCAGGCCT TGAAGGTGTT ACGTCAGAAA TGTATTGGTG AGCTGGCGCA AGGGCGTGAA
GCTCTGAAGG AACGGTAA
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| Protein sequence | MTPVPSQEQS SQPSSAWFDS LSRLIQPDAR NRSIGERLVE QCVRVSLMVK LRWAMLAALF
CYVLLAELFL APDIDLPIFH IEQWSLSLKA TAIFFAVAFP LVSLPCSVWR NCRLVIYLQV
LLDLLFVTAA IHWSGGVVSW LWPAYLLISL ESAFLFEKKR EVWGIGMIGA ALYGVLLAAE
QLDFIATVRM PFMEEESPSI LFELLMWLWV AGVNTVVSFF GAFLMDKIRS DHQKVQQSQE
ALTGFIATAH DLIFCCRQDG TLLYLNQVGQ DMIGPLEGEG GDISLFNLTD EEGKGLLARQ
FEKVTRRIDA GHFEMRLLSP AVGRILDLEV SLSTCCNDVP DQVIWGVCHD ITERNLAQRE
LIKLAHHDVL TGLPNRILLH DRLQQARAFA HRMNSRFALL FLDMDRFKII NDTLGHAVGD
DLLRMIAQRL KACFRETDTV ARIGGDEFVV LMLNVTDRTD ICTLNDKLLQ ELAQPFMIRG
HELFVTTSGG VCTYPDDEDD VEIMMQKADI AMYHAKALGR NNIQFYNDGM DQNSSRRFTI
ANSMRRGLDR GEFRLYYQPK LDVSSDCIVA TEALVRWQHP ELGLLAPTEF IQLAEESGLI
VELGEWVLRE ACRQNMVWRQ EGMRGLRVAV NLSGYQLQHS RLVETVRKVL DETGMPGELL
EFEITESVIM QNPDYAVEVL NEITNLGIHI SIDDFGTGYS SLAHLKRFSV NTLKIDKSFV
RDVENNTTDA AIASAIIAMG SSLNLKVIAE GVETEQQMDF LRDNNCDQVQ GFLISRPLPA
DQALKVLRQK CIGELAQGRE ALKER
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