Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1455 |
Symbol | |
ID | 6366316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 1510424 |
End bp | 1513420 |
Gene Length | 2997 bp |
Protein Length | 998 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642676856 |
Product | M6 family metalloprotease domain protein |
Protein accession | YP_001951694 |
Protein GI | 189424517 |
COG category | [S] Function unknown |
COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00413675 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAATA AAATTATCAT TTTTGTCATC GGCATCAGTC TTTGTGCCAC GCAACTGCAT GCCGGTCCGG CATCGCCGGA CCTAATTGAG GTGACGCAGC CAGATGGTAG TAGTTTCAAA ATCCGTAAAC AGGGGGATGA ATTTCAGAAC TGGAGTGAAA CCGAAGCAGG GCATACTGTT CTGAAAAACA AAAAAACAAA AGAATGGGAA TATGCTACTA AAAATGCTGA CGGCTCACTT GGTTTGTCAG GCCAGAAGGT TATGCCTCAG CAAAAAGCTC CTGCTGATCT ACCAAAGCGT CTGAAGCCGC AAAGAAACAC TGAGGCAGAA AAGCTGCTCT CAGAGCACAT TAGAAACACC TACCAACAAC GTCTGAATCA AGCATCTGCA ACACCCAGTT CGGGGATCTC AGCTGGAACA GGTAATTGGG TCCCATTCCC GGTTTCAGGA AATCGAAACC TCCTGATTGT TTTGGTTAAT TTTGCAGATC GCACTATGAC AACAACAACT CCTGCAAGTT GGAGCGCAAA AATATTTGAT ACAACTGCCG GTGCTAAATC AGTAGCAAAA TATTTCAAAG ACAACTCATT CAGTACGCTT AACGTTCTAC CGGCAACTCA TACCCAATCC GCAACGCCTG GTGTTGTCAG TGTTACCGTT GCAGACAATC ATCCTAATTC TGGCAATAGT TACGATTATA CTTCCGAGAC AACCATTCTC AATCATGCCC TGGCACAAGC TGCCTCATAT GTAAATTTTG CTTCGTTTGA CACCAACAAT AATGGCACTC TTGAACAATC AGAGCTTTCC ATTTATTTCA TCTACGCTGG CTACGAAGAT TCAGGCAGTG ACAAGACACC AAAGATATGG GCACATGCTT GGGGGGGGTA CGACGTACTT GCAAGCGGTA AATACGTCAC CCGCTGGGCT ATTAACGGTG AACTTAACAA CTCAGATGTT CAGCATCCGA TGGGAGTTAT AGCACATGAG CTTGGCCATG CCTTGTGTGG ACTGCCAGAC CTGTACGACA CTTCATATAG CAACGGAGGC ATGGGTCATT TTTCTCTCAT GGCAGGCGGC AGTTGGGGAG CAGATATCGG AGAGTATAGT GGTGTAACAC CGACAGCTTT AGATGCCTGG ACACGGGAAT ACCTTGGCTG GGCAACACCG GTCACTCCAA CCTCATCTGG CAACTTGTCA CTAGCCCACC CGCTTTCCTC TCAGAATGCA GTCTATAAAT TCGTGTCGCC ACTTATCAGC AGTACTGAAT ATTTTCTGGT TGAAAACCGC CAGCCTACTG GATGGGATCT TGGGCTTCGT AGTTATCTAG GTTCAGGGTG GCTGGGTGGC TTGCTGATTA CCCATATTGA CATTACATCC GGCTCTGTTG GAGGTAATGA TATTAACGAT TACGAGACAA ATAATGTTGC CGGTGGGGGG CACCAGGGGG TCGTACCGGT CCAGGCTAGC ACCGCAAACT GCAACATGCT GACCACAACA AGCCGAGGCT GCAGCACCAC CCTCTACTAT TCCAGCAACA ATGCCAGCTG GGGACCGGTC ACCACCCCCA ACTCAAACTA CTACAGCGGC ACTGCCACCA ACTTTAGTCT AACCGGCATC TCAGCACAGG CCGCCACCAT GACCGGCAGC ATTTCTTTTA TCCCTCCACT GACCAAGACC CTGACAGTTT CTAAAGGCAG TACCGGCAGC GGGACGGTCA GTTCCTCGCC GGCCGGGATC TCATGCGGCA GCACCTGCTC GGCAAGCTTC CTGCAAAATG AGACCGTGAC CTTAACTGCA GCTGCCGACG CAGGTTCAAT CTTCACCGGC TGGTCCGGCG GCGGTTGCTC CGGCACTGGA ACCTGCGTGG TCAGCCTGGC CAATGACACG ACTGTGACGG CAAGCTTCGC CACGGCAACC ACCCTCATCA GCGAAAACTT TGACAGTGTG ACGGCACCAA GCATTCCTTC ATTTTGGTCA ACAAATATTG TTACAGGCAG TTACAACTGG GCTACAAGCA CCGACGCCGT TACTCCTCAC AGTGGCGCGA ATGCACTTTA TTATAATTCC TATTGGGCTC CATCTGGCTC TGCAGCAGCG CTGATATCTC CGTCGTTTTC ATTGGCAACG ACAACCAACA ATACCATTTC ATTCTGGATG TACAGGGACA CCAACGGTTC TTCTTATGCC GACAGAGTTG AGATCTACGT CAATAATAGT AACAGTTTGA CCAATGCAAC CCTACTGGGA ACCGTTAATC GCGCAACAGC TCTTGCACCT GCCGTCAATT CATACGGGTG GTACAACTAT TCATTCACCA TTCCAGAATC ATTTAATTCT GCAACCAATT TCCTGATCAT AAAAAGCATC AGTGCCTACG GTTACAATAT CTACATTGAC GATATCAGCG TTACAGGTAT TCCTCTTTTA CAGTACACTC TGACCGTTAA CCACGCCTAC ACCGCTGCCG GAGCTATCAA GGGCGGAGGC AGCATCAACG GCTCCGGCAT CTCCTGTAGC GCCGTCAATG GCGGTAGCAA GACCGGAACC TGCTCAGTCT CCCTTGACGA TGGCAGCACT GTGACCCTTG CTGCAGCGGC TGATGCAAAC TCAACCTTCA ACGGCTGGAC CGGAGGAGGT TGCTCCGGCA CCGACGGCTG CAGCTTCACC ATCGCTTCCG ATACCACCGT AACCGGCACC TTTGCCGGTG CCTATAAGAC CAAAATCAGC GGTGGCAACG GATATGACAC CTTAACCCTT GCCCATGGCA ATGCCGCTGA CAACGCCACT ATCCTGGCCC GCGAACTCCA TAATGCCACC TCCCTGGCTG CAGAACCGTT TACAGAAAAC CTGACCGTAA CCAAGCCGAT AACCCTCAAG GGTGGCTATA ATGCCGCATT CAGCAGCAAT GCCGGTCTTT ACAGCACACT CGCAGGCATC CTCACCATTG GCGGCACAAG CGGTAGCCTG ACAGTGGAAA ACCTGATCAT AAAATAG
|
Protein sequence | MLNKIIIFVI GISLCATQLH AGPASPDLIE VTQPDGSSFK IRKQGDEFQN WSETEAGHTV LKNKKTKEWE YATKNADGSL GLSGQKVMPQ QKAPADLPKR LKPQRNTEAE KLLSEHIRNT YQQRLNQASA TPSSGISAGT GNWVPFPVSG NRNLLIVLVN FADRTMTTTT PASWSAKIFD TTAGAKSVAK YFKDNSFSTL NVLPATHTQS ATPGVVSVTV ADNHPNSGNS YDYTSETTIL NHALAQAASY VNFASFDTNN NGTLEQSELS IYFIYAGYED SGSDKTPKIW AHAWGGYDVL ASGKYVTRWA INGELNNSDV QHPMGVIAHE LGHALCGLPD LYDTSYSNGG MGHFSLMAGG SWGADIGEYS GVTPTALDAW TREYLGWATP VTPTSSGNLS LAHPLSSQNA VYKFVSPLIS STEYFLVENR QPTGWDLGLR SYLGSGWLGG LLITHIDITS GSVGGNDIND YETNNVAGGG HQGVVPVQAS TANCNMLTTT SRGCSTTLYY SSNNASWGPV TTPNSNYYSG TATNFSLTGI SAQAATMTGS ISFIPPLTKT LTVSKGSTGS GTVSSSPAGI SCGSTCSASF LQNETVTLTA AADAGSIFTG WSGGGCSGTG TCVVSLANDT TVTASFATAT TLISENFDSV TAPSIPSFWS TNIVTGSYNW ATSTDAVTPH SGANALYYNS YWAPSGSAAA LISPSFSLAT TTNNTISFWM YRDTNGSSYA DRVEIYVNNS NSLTNATLLG TVNRATALAP AVNSYGWYNY SFTIPESFNS ATNFLIIKSI SAYGYNIYID DISVTGIPLL QYTLTVNHAY TAAGAIKGGG SINGSGISCS AVNGGSKTGT CSVSLDDGST VTLAAAADAN STFNGWTGGG CSGTDGCSFT IASDTTVTGT FAGAYKTKIS GGNGYDTLTL AHGNAADNAT ILARELHNAT SLAAEPFTEN LTVTKPITLK GGYNAAFSSN AGLYSTLAGI LTIGGTSGSL TVENLIIK
|
| |