Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1242 |
Symbol | |
ID | 6367548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 1290404 |
End bp | 1291255 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642676639 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_001951484 |
Protein GI | 189424307 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00016128 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAG AGCCATCCAA AGTTCTCCCC TTTATCGAGC ATCTGGTCGA GTTACGCAAA CGCCTGATCA TCATCGTGGT GGCCGTGATC ATCGGCATGG GTTTCGCCTG GAATCTGGCC GACGAAATCC TGGTTTTCAT GGAAAAGCCG CTGACCGGCA CCACCTATCT GGATACGGCC AAACAGCAGG GCTATCTCTA CCTGAAAGAG AACTATCCGG CCATCTACGG TCGTGCAAAC CTTGAAAAAG AACTGAACAA GCCCAAGAAG CAGCATGCCC TCAACTACAC GGCTCCGCTT GAACCATTCT TTATCCAGTG CAAGATCTCG GTGATTGCCG GCTTCGTGCT GGTGCTACCG ATTGTGTTTC ACCAGATCTG GGCCTTCATC GCACCCGGCC TGACCCGCAA GGAACGCAAG CTGGTGGTGC CGTTTATCAC TGTGGCCACC ATCGCCTTCT GTATCGGTGC GATGTTTTTT CTGACCACCA TCTGGCCTTT CATTATCAAC TTTTCACTTT CCTACGAAAC CGAGGGACTA CGCAGCTGGC TGTCACTGTC AGCCTATGTT GATTTCTGTC TGCGTCTGAT CCTGCTGTTC GGCCTGATTG CCGAGCTGCC GGTGATCACT CTGCTGCTTG CACGCTTCGG CATTGTCTCC TACCAGTTTC TGGCTCCCAA ACGTAAATAC GCCCTGCTGG CCAGTTCGAT TGTGGCCGCC TTCCACTCAG ACCTGGTAAC CATGTTTGTG ATCATGATCC CGCTCTATCT GATGTACGAG GTCAGCGTCT GGGTGGCACT GCTCTTCGGC AAGAAAAAAG TGAGTCAAAC CGTTGAGCCG GAGGCCGCGT AG
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Protein sequence | MSEEPSKVLP FIEHLVELRK RLIIIVVAVI IGMGFAWNLA DEILVFMEKP LTGTTYLDTA KQQGYLYLKE NYPAIYGRAN LEKELNKPKK QHALNYTAPL EPFFIQCKIS VIAGFVLVLP IVFHQIWAFI APGLTRKERK LVVPFITVAT IAFCIGAMFF LTTIWPFIIN FSLSYETEGL RSWLSLSAYV DFCLRLILLF GLIAELPVIT LLLARFGIVS YQFLAPKRKY ALLASSIVAA FHSDLVTMFV IMIPLYLMYE VSVWVALLFG KKKVSQTVEP EAA
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