| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1175 |
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| Symbol | |
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| ID | 6367804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1227474 |
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| End bp | 1228943 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642676572 |
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| Product | outer membrane porin FmdC, putative |
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| Protein accession | YP_001951417 |
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| Protein GI | 189424240 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000392921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA AAAGCAGCAA GCGGAATCTG CAGTATTGCG CTGTTGCACT GGCAGCCACC
ATGCTGTGCG CGGGGGCTGC CCAGGCAGGA CCGCGAATCG AGTTTGGCGA TGATGGCGGT
TTTGTACAGA TTGATCTGAA GGGGCAGTTT TATCTGGAAA ATACCAGTTT AGGTGGTGGA
AACGACGGCA AGGAAAACAG GACTGACCTG CACTTCATGC GTAACCGCCT GGGTCTGACC
GGCATGCTGG ATGAGACCTG GGGCTACAAG TTCCAGACCT GCGGTAACAC CGGCACCACC
AAAAACCCGT TCATGTACAC GCTTTCACAG CAGGATACCG ACTGGAACGA CCGTGATATA
CGGATCATTG ACGCCTACGC CATTGCAAAT TTCAACGAGC ATATCAACCT GAAGGTCGGT
CTGACCAAGA TTCCTTTAAG CCGTGCCAAT CTGGATGACT GTTTCGCACC GCTGTCACAG
GACCGCTCCA TGTTTGTCTA CTCAGCTTAC GGATCCTCAC CGGCCAAATT CAGCCGTGAC
CTGGGTGGCG TGGCAGTGGG ACGTTTCTTT AATGACCGAC TGACCTATTT TGCCGGTATC
TTTCAGGGAC GAGAAGGGAC CAGCCAAACG GCTATTCCCT ATGCCCCCAA CTATCCGAAC
GGCGCCCCGA ACAAAATCAT GGGGGCTCCT GCCACTACCA GTACAGCCCC AAAAACCAAT
CTTGAATATG TCGCGCGCCT GACCTTTGAC TTCCTCGAAT CAGAAGGCGG TTCCGGTTAT
CAAGGCACCT ATTTCGGAGA GAAAAAAATC CTCAACATCG GCGTCGGCGG CGCGTTTCAG
CCTCAGGCAG CCTACAAAAA TACCCAGAAC GTCTACTGGC TGTCAGACGG CACTTCCTCC
ACCACGGCCC CAGGACCTGC AACGACATCC TCGGTAACCA AAGTAACAAC AATGGCCAAC
ACCAGCAAAG GTACGGTTGA TTACAGTGCA ATTGCGGTTG ACGGCATGTT TGAATACCCG
ACCGCTTTTG GTGTCCCCAC GATTACCGCA CAATATCTGA AAGTAGATTT TGAAGATGCC
TATCTGACAG CCTCATCCGG TGATAAACTG GCAGTGGTTT CCGGCATGAA CGGCCAGAAG
GAAGGTTTCT ACACCAAGGT TGCCCATATC CTGCCGTTCA AGATCGGCGG TATGGGCAAG
CTGCAACCCT ACGCTCTGTA TGAAAACTGG CGTTTTGCCC ACCTGTTGGG GGTTGACGGT
CAACGGATTG AGCAGATCGG TGGTGGCCTC AACTACTACA TCACCGGCGA CCAGCGGGTC
CGTCTGACCG CTGAATATCT GAAAACAGAC TTCTCCAAGA AAATGGCGTT TGTGGTACCG
GGTGCCAGTA CGCCCGGTGT TGCCTCAGGC TACGTTAAAG ACGTCAACTC GTTCGACACT
TTCCGTATGA TGCTGCAGGT GGTATTCTAG
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| Protein sequence | MSKKSSKRNL QYCAVALAAT MLCAGAAQAG PRIEFGDDGG FVQIDLKGQF YLENTSLGGG
NDGKENRTDL HFMRNRLGLT GMLDETWGYK FQTCGNTGTT KNPFMYTLSQ QDTDWNDRDI
RIIDAYAIAN FNEHINLKVG LTKIPLSRAN LDDCFAPLSQ DRSMFVYSAY GSSPAKFSRD
LGGVAVGRFF NDRLTYFAGI FQGREGTSQT AIPYAPNYPN GAPNKIMGAP ATTSTAPKTN
LEYVARLTFD FLESEGGSGY QGTYFGEKKI LNIGVGGAFQ PQAAYKNTQN VYWLSDGTSS
TTAPGPATTS SVTKVTTMAN TSKGTVDYSA IAVDGMFEYP TAFGVPTITA QYLKVDFEDA
YLTASSGDKL AVVSGMNGQK EGFYTKVAHI LPFKIGGMGK LQPYALYENW RFAHLLGVDG
QRIEQIGGGL NYYITGDQRV RLTAEYLKTD FSKKMAFVVP GASTPGVASG YVKDVNSFDT
FRMMLQVVF
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