| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1093 |
|---|
| Symbol | |
|---|
| ID | 6368153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1141135 |
|---|
| End bp | 1142706 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642676488 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001951335 |
|---|
| Protein GI | 189424158 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3863] Uncharacterized distant relative of cell wall-associated hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000429032 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCGT CATTATTCAC CAAAATCCTG CACCTAACAC TGGTTGGCCT GCTGTTCGTC
ACTGCGCAAC AGGCGCAGGC TGTTTCCACA GACGAACTCC AAGGGCAGCT GTCTTCTGCA
TCCACAACAC TGCCTGCCCA ATGCCGGGAT CACCTACTGA AGGCCCATGG TGTTGCCAGA
CAGCAGGTGG ATGCAGGACT GAATCAGGAG CTGGCCCGTT TTCGCACCCT GGCAGAGCAG
GCCTTGATGC TGCGGGCCGA GACCATCTCG GTGGGCAGAC GGATCAAAAA CCAGCTGGAG
CAGAAAAAAC CGCTCTCCGG CGACGATCTG GAGATCATGA ACATCGGCAT TACCGAGCAC
CTGAAGCTGC GCAAGGAGCT GATGGAGGTT GCCGAATCCC ACGAATGCTG GCTGGATGGG
ACCGAACAGG AGTGGCAGAG CCGGGGCGTA TCGCCGGAGA CACGGTTGAA CGGGGTGATG
ATGTCGCTTG CATCCGCCTT TTTGCTGTAT GACAATTATC TGCTGTCGGT CTCGCTGTTT
GAAGGGGATG CCAAGCTGCG GCGCCTGCTG AATGAGGCTG ATCCCGGCTA TGCGGTGCAG
AGCGCCGCCC TGGCCAAGGT AACCCTCTCC TACAACTCCA TCAACAACCG CAGCCGGGCC
CGCAAGGCGA TCAAATTCTA CGAGCGGGAG GCAAAGCGAT TCAGCCGGAC CGTGGATGCC
AACCCGGAAA CCGCCTACAT CAATCTGTTG ATCAAGCAGA GCCCTTCCTA TTCCATGGTG
CGCACCTGGT CACCGTTTTA CGTGGTGGGC CGCAAGGTCG GCTTTCTGGG TGGCGTGACG
GAAGACACCC TTTCCGGTCT GGAGCGGCAC GGTATCAGCC TGTTCAGCAT GGTCTTCGGC
AATGCCGTCG GGCTGGTGGA AACCCGCAAG GGCAAGCTGT ATCGCAAACC GCCGGTCAGG
GAACAGTTGA CAGGCACCCT GCAGGCTGGC GATGTGCTGT TGGAAAAGAC CCCTTTCCGC
CTGACCGACA AGCTGATCCC CGGCTACTGG GGCCACGCAG CGGTCTGGAT CGGCACTGAA
AAGGAGTTGC GGGAACTGGG TATCTGGGAC AATCCACTGG TCAAGCGCTA CCATGACAAG
ATTCAGCAGG GACGCGGCGT GGTTGAGGCG TTGCGTTCCG GGGTGGAGAT AAATCCGCTT
GAGCAGTTTA TGAATATCGA CAGCATCGGA ATCTTACGCA AACAGAACAT CAGCAGGGAT
GACCGGATCA GAGTCATCCT GCAATCATTG CGGCAGGTGG GGAAACCGTA TGATTTCAAT
TTTGATGTGG AATCAAAGGA GCGGGTCTAC TGCTCAAAGC TGGTCTATCT GACCTACAGT
GGGGTGGAGT GGCCCACCAA AAAATCGCTG GGGCGCACCA CCTTTACCCC TGATGATGTG
GCGAACCGCG CCCTGGCAGG TGATTTCCGG TTGGTGCTGT TTTACCACAA CGGCAAAGAA
GTTCAAAAAG CGCCACTTGA ACAGATGGCA AGTCTGATGG AGCAACAGGT TAAGGCATCT
GCAGCACGTT AA
|
|---|
| Protein sequence | MPPSLFTKIL HLTLVGLLFV TAQQAQAVST DELQGQLSSA STTLPAQCRD HLLKAHGVAR
QQVDAGLNQE LARFRTLAEQ ALMLRAETIS VGRRIKNQLE QKKPLSGDDL EIMNIGITEH
LKLRKELMEV AESHECWLDG TEQEWQSRGV SPETRLNGVM MSLASAFLLY DNYLLSVSLF
EGDAKLRRLL NEADPGYAVQ SAALAKVTLS YNSINNRSRA RKAIKFYERE AKRFSRTVDA
NPETAYINLL IKQSPSYSMV RTWSPFYVVG RKVGFLGGVT EDTLSGLERH GISLFSMVFG
NAVGLVETRK GKLYRKPPVR EQLTGTLQAG DVLLEKTPFR LTDKLIPGYW GHAAVWIGTE
KELRELGIWD NPLVKRYHDK IQQGRGVVEA LRSGVEINPL EQFMNIDSIG ILRKQNISRD
DRIRVILQSL RQVGKPYDFN FDVESKERVY CSKLVYLTYS GVEWPTKKSL GRTTFTPDDV
ANRALAGDFR LVLFYHNGKE VQKAPLEQMA SLMEQQVKAS AAR
|
|---|
| |