Gene Glov_1025 details

Gene Information

• Locus tag: Glov_1025
• Symbol: rho
• ID: 6369013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 1066139
• End bp: 1067386
• Gene Length: 1248 bp
• Protein Length: 415 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642676420
• Product: transcription termination factor Rho
• Protein accession: YP_001951268
• Protein GI: 189424091
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0252595
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACCTCC AGGACTTGAA GAACAAAAAA ATTAGCGAAC TGAATGGTAT TGCCCGTGAT 
CTGAGTATTG AGGGTGCTTC AGGGCTTCGA AAGCAGGATT TGATCTTTGC CATCCTGAAT 
GCCCAGACTG AACAGAACGG TTCAATCTAT GGGGAGGGGG TTCTGGAGAT ACTGCAGGAT 
GGTTTTGGCT TCCTGCGGGC CCCGGACTAT AACTATCTGC CCGGCCCGGA CGATATCTAT 
GTCTCCCCCA GCCAGATCCG TCGTTTTAAC CTGCGCACCG GTGATACGGT CTCCGGTCAG 
ATCAGGCCGC CCAAAGAGGG TGAGCGTTAT TTTGCCCTGC TGAAGGTTGA GACGATCAAC 
TTTGAAACCC CTGAGGCCGG ACGGGATAAG ACCCTCTTTG ACAACCTGAC GCCGCTCTAT 
CCGGAAGAAA AACTGAAGCT TGAAACCGCC CCGGATAATT ACGGTATGCG GGTGATGGAG 
CTGGTCTCGC CGATCGGCAA GGGGCAGCGT GGTCTGATCG TGGCGCCACC CCGGACCGGC 
AAGACCATGC TGATTCAGAA TATTGCCAAC TCGATTGCCG CCAATCATCC TGAAGTCTAC 
CTGATTGTAC TGCTGATTGA TGAGCGTCCT GAAGAAGTAA CGGATATGCA GCGTTCGGTC 
AATGGTGAGG TGGTTTCGTC CACCTTTGAT GAACCTGCCA CCCGTCACGT CCAGGTGGCC 
GAGATGGTGA TTGAAAAGGC CAAGCGTCTG GTGGAACACA AGAAGGATGT GGTGATTCTG 
CTGGACTCGA TTACCCGTCT GGCCCGCGCC TACAACACTG TGCTGCCTCC CTCCGGCAAG 
ATCCTGACCG GCGGTGTGGA TGCCAATGCC CTGCAGAAGC CGAAGCGTTT CTTCGGTGCG 
GCCCGCAATA TTGAGGAAGG CGGTTCACTG ACCATCATCG CCACTGCCCT GGTGGATACC 
GGCAGCAAGA TGGATGAGGT GATCTTCGAG GAATTCAAGG GTACCGGCAA CATGGAGGTC 
CATCTGGATC GCCGTCTGGT GGAGAAGCGT ACCTTCCCGG CCATTGATAT CAATAAGTCC 
GGTACCCGCA AGGAAGAGCT GCTGATAGAG CGGACCATGT TGAACCGGAT CTGGATCCTG 
CGCAAGATTC TGCACCCGAT GAACGTGGTC GATGCCATGG AGTTTCTGCT GGACAAACTT 
TCTGAGACCA AGACCAATCA GGATTTTATC GATTCAATGA GCAAATAG 

 

Protein sequence

MNLQDLKNKK ISELNGIARD LSIEGASGLR KQDLIFAILN AQTEQNGSIY GEGVLEILQD 
GFGFLRAPDY NYLPGPDDIY VSPSQIRRFN LRTGDTVSGQ IRPPKEGERY FALLKVETIN 
FETPEAGRDK TLFDNLTPLY PEEKLKLETA PDNYGMRVME LVSPIGKGQR GLIVAPPRTG 
KTMLIQNIAN SIAANHPEVY LIVLLIDERP EEVTDMQRSV NGEVVSSTFD EPATRHVQVA 
EMVIEKAKRL VEHKKDVVIL LDSITRLARA YNTVLPPSGK ILTGGVDANA LQKPKRFFGA 
ARNIEEGGSL TIIATALVDT GSKMDEVIFE EFKGTGNMEV HLDRRLVEKR TFPAIDINKS 
GTRKEELLIE RTMLNRIWIL RKILHPMNVV DAMEFLLDKL SETKTNQDFI DSMSK