| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1003 |
|---|
| Symbol | |
|---|
| ID | 6369300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1041427 |
|---|
| End bp | 1042995 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642676398 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_001951246 |
|---|
| Protein GI | 189424069 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3573] Predicted oxidoreductase |
|---|
| TIGRFAM ID | [TIGR01813] flavocytochrome c |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATA CACTAATACT TCAAAAGGTG TCTAAAAAGA CCATCAGAAA CGTAATGCTC
TTTGCCATCA TGCTGGTCAT GGTTTCTCCG ACCGTTATTC TGGCAGCAGA AAAAGGACAA
CAGCATGATG CCATCGTGGT CGGTGCCGGC ATAGCGGGAC TTTCTGCCAG CTGGGAACTG
GCGCAGAAAG GTTTTGATGT TGCCGTCATT GAGATGCAAC CTCTCTATGG CGGGACCGCG
ACGATGAGCG AGGGGGCACT CTGCATCGTA GGCACACCGG AGCAGGCGAA GGCCGGCATC
ATTGATTCAC CGCAGATCGC CTTTAAAGAT TTCATGACCT ATGGTAGTGA TCAGGGCGGT
CCCGGTCCCG ATGTCGAATG GGTGCGCTAC TACACCAACA AGTCTCGCCA TGAAATCTAC
GACTGGCTTA CTGGACTGGG CGTCACTTTT GAGAAGAGCG CGGTCCTTAT GCCGGGAAAT
AGTGTGCCGC GCTGGCATAA GGTTATCGGC AAGGGAAGAG GACTGGTCGA ACCGATCCAC
CGGGCCTGCA AGCAAAGCAG CAGGGTAACG TTTTTCTACG GACATAAGGC GCTTTCGTTG
ATCAGGGGTA AAAGCGGCAG GATTTCAGGC ATTCGGGCAC AACGGCTCAA AGATAACGTA
TCTATCGATT ATCTTGCACC GGTCGTAATA CTGGCAACAG GCGGGTTTCA GGGCAATATG
AAGATGGTGC AAAAATATTG GCCTGAAAGA CAGCCGTTTC CTGAACGGAT ACTGAAAGGT
GCCGGAATAA ACGCCACGGG CTCAGGCCAT GAAATGGCCC AGGCCGTAGG CGCCCGATTG
TTCAACATGC AGTACCAGTG GAATTACGCC ACCGGGCTGC AAAGCCCATC CGATATCACC
GGTTCGCGAG GGTTGAACGC TTTCAGTCAG CAATCGATCT GGGTCAACAA GGCAGGCTCA
CGTTTCGTAA ATGAATCTCA AGACACCAGG ATGACATTTC CCGAACTGAT CAAACAGCCC
GGCGGCACCT ACTGGGCGAT ATTCGACAGT GCGGCCCGCA ACAGTTTTTT CATATCCGGC
TGGAGCCGGG AGTCAATCGA AGAGGGGCTT TTCAATAATC AACAAAACAG CAGGTTCGTA
AAATCTGCAC CGACTATAGC AGAGCTGGCT GTGGCTGCGG GACTTCCCCC GCAGATACTT
ACTGAAACCG TGAATCATTG GAATGCCATG GTAACTGCTG GTAGCGACAC TGATTTTGGC
CGCATCGGCT GCTGCCGGAC CCCCTGGTCC AATCCGAACA GGATCGAACG GGCGCCTTTT
TACGCCGTAC AATTCTACCC GCTGGCACGT AAGAGCATGG GTGGCGTATC TATCGATCGG
TCCTGTCGGG TTTTAGATGA CTCGGGAAAG CACATTCCCG GCCTGTATGC CGCTGGCGAA
CTGACCGGCC TCGCCGGTGT CAATGGAAAG GCTTCACTTG AAGGAACATT CCTGGGAACC
TCCATCATGA CTGGCCGTGT GGCGGGACGG GCAGCTGCGG CAGAGCTGTC AGGGCAAACA
AAACCATAA
|
|---|
| Protein sequence | MIDTLILQKV SKKTIRNVML FAIMLVMVSP TVILAAEKGQ QHDAIVVGAG IAGLSASWEL
AQKGFDVAVI EMQPLYGGTA TMSEGALCIV GTPEQAKAGI IDSPQIAFKD FMTYGSDQGG
PGPDVEWVRY YTNKSRHEIY DWLTGLGVTF EKSAVLMPGN SVPRWHKVIG KGRGLVEPIH
RACKQSSRVT FFYGHKALSL IRGKSGRISG IRAQRLKDNV SIDYLAPVVI LATGGFQGNM
KMVQKYWPER QPFPERILKG AGINATGSGH EMAQAVGARL FNMQYQWNYA TGLQSPSDIT
GSRGLNAFSQ QSIWVNKAGS RFVNESQDTR MTFPELIKQP GGTYWAIFDS AARNSFFISG
WSRESIEEGL FNNQQNSRFV KSAPTIAELA VAAGLPPQIL TETVNHWNAM VTAGSDTDFG
RIGCCRTPWS NPNRIERAPF YAVQFYPLAR KSMGGVSIDR SCRVLDDSGK HIPGLYAAGE
LTGLAGVNGK ASLEGTFLGT SIMTGRVAGR AAAAELSGQT KP
|
|---|
| |