| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0964 |
|---|
| Symbol | |
|---|
| ID | 6366860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1003665 |
|---|
| End bp | 1004126 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642676359 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001951207 |
|---|
| Protein GI | 189424030 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGCA CCTGCAAACT GGCAACGATC CTGTCCTGCA TCGCGATATG CCTTAATCCC
GCCATGGGGT ATGGCTTCTG CTTTGAAGAA GCAGGCAGGA TCTACAATCT GCCGCCAACC
CTCTTGTTAA GCATTGCCAG ACAGGAAAGC AACCTGAAGC CTGATGCGAT CAACCGGAAT
CTGAACGGCA GTTACGACTT TGGCCTGATG CAAATCAACT CAAGCTGGGC AAAACGGCTG
GGGCCTGAAC TGTGGTCACA ACTGGGTGAT CCTTGCACAA ATCTCAAGGT TGGTGCCTGG
ATCCTGCGCC AGTGCATCAA TGACTACGGC TATGGCTGGA AGGCAGTAGG CTGTTACAAC
AGCAGAACAC CGGGCAAAAA TGAACGTTAT GCCCAACGCA TTGCAGCACA ATTGGCAAAC
CACAGCATGC AGGCATCACT GACCCAGGAT GGTGCACGAT GA
|
|---|
| Protein sequence | MKGTCKLATI LSCIAICLNP AMGYGFCFEE AGRIYNLPPT LLLSIARQES NLKPDAINRN
LNGSYDFGLM QINSSWAKRL GPELWSQLGD PCTNLKVGAW ILRQCINDYG YGWKAVGCYN
SRTPGKNERY AQRIAAQLAN HSMQASLTQD GAR
|
|---|
| |